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AT3G59830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.936
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Integrin-linked protein kinase family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT2G43850.1); Has 148950 Blast hits to 121470 proteins in 4033 species: Archae - 166; Bacteria - 14141; Metazoa - 63831; Fungi - 11612; Plants - 31303; Viruses - 594; Other Eukaryotes - 27303 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG0192EMBL:CP002686EnsemblPlants:AT3G59830EnsemblPlants:AT3G59830.1entrez:825152Gene3D:1.25.40.20
GeneID:825152GO:GO:0004712GO:GO:0005524GO:GO:0007229Gramene:AT3G59830.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF378
InParanoid:F4J9G8InterPro:IPR000719InterPro:IPR001245InterPro:IPR002110InterPro:IPR011009InterPro:IPR020683KEGG:ath:AT3G59830
OMA:WGSTAAVPaxDb:F4J9G8Pfam:PF07714Pfam:PF12796Pfam:PF13857Pfscan:PS50011Pfscan:PS50088
Pfscan:PS50297PRIDE:F4J9G8PROSITE:PS50011PROSITE:PS50088PROSITE:PS50297ProteinModelPortal:F4J9G8Proteomes:UP000006548
Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_191542.2SMART:SM00248SMR:F4J9G8STRING:3702.AT3G59830.1SUPFAM:SSF48403
SUPFAM:SSF56112TAIR:AT3G59830UniGene:At.50294UniProt:F4J9G8
Coordinates (TAIR10) chr3:-:22103006..22105323
Molecular Weight (calculated) 54026.00 Da
IEP (calculated) 9.20
GRAVY (calculated) -0.46
Length 477 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNIAAQLKR GISRQFSTGS MRRTLSRQFT RQNSLDPRRN NMRFSFGRQS SLDPIRRSPE SLSCEPHMSV PENLDSTMQL LFMASKGDVN GVEELLNEGI
101: DVNSIDLDGR TALHIASCEG HYDVVKVLLS RRANIDARDR WGSTAAVDAK YYGNVEVYNL LKARGAKAPK TRKTPMTVGN PKEVPEYELN PLELQVRKVD
201: GISKGTYQVA KWNGTRVSVK IFDKDSYSDP ERVNAFTNEL TLLAKARHPN IVQFVGAVTQ NLPMMIVVEC NPKGDLSVYL QKKGRLSPSK ALRFALDIAR
301: GMNYLHECKP DPIIHCELMP KNILLDRGGQ LKISGFGLIK LSKIGEDSAK VVNHEAQIDK SNYYIAPEIY KDEVFDKRAD VHSFGVILYE LTEGVSLFHP
401: KPPEEVAESI CIEGKRPTIR TKSKSYPPEL KELIEECWHP EISVRPIFSE IIIRLDKIVT NCSKQGWWKD TFKFPWK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)