AT3G59830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.960 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Integrin-linked protein kinase family | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT2G43850.1); Has 148950 Blast hits to 121470 proteins in 4033 species: Archae - 166; Bacteria - 14141; Metazoa - 63831; Fungi - 11612; Plants - 31303; Viruses - 594; Other Eukaryotes - 27303 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22103006..22105323 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54026.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 477 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDNIAAQLKR GISRQFSTGS MRRTLSRQFT RQNSLDPRRN NMRFSFGRQS SLDPIRRSPE SLSCEPHMSV PENLDSTMQL LFMASKGDVN GVEELLNEGI 101: DVNSIDLDGR TALHIASCEG HYDVVKVLLS RRANIDARDR WGSTAAVDAK YYGNVEVYNL LKARGAKAPK TRKTPMTVGN PKEVPEYELN PLELQVRKVD 201: GISKGTYQVA KWNGTRVSVK IFDKDSYSDP ERVNAFTNEL TLLAKARHPN IVQFVGAVTQ NLPMMIVVEC NPKGDLSVYL QKKGRLSPSK ALRFALDIAR 301: GMNYLHECKP DPIIHCELMP KNILLDRGGQ LKISGFGLIK LSKIGEDSAK VVNHEAQIDK SNYYIAPEIY KDEVFDKRAD VHSFGVILYE LTEGVSLFHP 401: KPPEEVAESI CIEGKRPTIR TKSKSYPPEL KELIEECWHP EISVRPIFSE IIIRLDKIVT NCSKQGWWKD TFKFPWK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)