suba logo
AT3G59700.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 0.664
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : lectin-receptor kinase
Curator
Summary (TAIR10)
member of Receptor kinase-like protein family
Computational
Description (TAIR10)
lectin-receptor kinase (HLECRK); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G59740.1); Has 126414 Blast hits to 124878 proteins in 4927 species: Archae - 148; Bacteria - 14786; Metazoa - 45832; Fungi - 11120; Plants - 35211; Viruses - 459; Other Eukaryotes - 18858 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G59700-MONOMERBioGrid:10453EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IEZ9EMBL:AF001168EMBL:AL138659EMBL:CP002686
EMBL:X91630EnsemblPlants:AT3G59700EnsemblPlants:AT3G59700.1entrez:825139
Gene3D:2.60.120.200GeneID:825139Genevisible:Q96285GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0016021GO:GO:0030246
GO:GO:0046777GO:GO:0090333GO:GO:1900425Gramene:AT3G59700.1
hmmpanther:PTHR27007hmmpanther:PTHR27007:SF13HOGENOM:HOG000116555InParanoid:Q96285
InterPro:IPR000719InterPro:IPR001220InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR031049KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1KEGG:ath:AT3G59700OMA:IGFNGYFPANTHER:PTHR27007:SF13
PaxDb:Q96285Pfam:PF00069Pfam:PF00139Pfam:Q96285
Pfscan:PS50011PhylomeDB:Q96285PIR:S68589PRIDE:Q96285
PRO:PR:Q96285PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q96285Proteomes:UP000006548RefSeq:NP_191529.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q96285STRING:3702.AT3G59700.1
SUPFAM:SSF49899SUPFAM:SSF56112TAIR:AT3G59700tair10-symbols:ATHLECRK
tair10-symbols:HLECRKtair10-symbols:LECRK1TMHMM:TMhelixUniGene:At.24664
UniProt:Q96285
Coordinates (TAIR10) chr3:+:22052146..22054131
Molecular Weight (calculated) 74440.30 Da
IEP (calculated) 6.70
GRAVY (calculated) -0.13
Length 661 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRELIILCQ PILVLFLTLF YNSHGYFVSQ GSVGIGFNGY FTLTNTTKHT FGQAFENEHV EIKNSSTGVI SSFSVNFFFA IVPEHNQQGS HGMTFVISPT
101: RGLPGASSDQ YLGIFNKTNN GKASNNVIAI ELDIHKDEEF GDIDDNHVGI NINGLRSVAS ASAGYYDDKD GSFKKLSLIS REVMRLSIVY SQPDQQLNVT
201: LFPAEIPVPP LKPLLSLNRD LSPYLLEKMY LGFTASTGSV GAIHYLMGWL VNGVIEYPRL ELSIPVLPPY PKKTSNRTKT VLAVCLTVSV FAAFVASWIG
301: FVFYLRHKKV KEVLEEWEIQ YGPHRFAYKE LFNATKGFKE KQLLGKGGFG QVYKGTLPGS DAEIAVKRTS HDSRQGMSEF LAEISTIGRL RHPNLVRLLG
401: YCRHKENLYL VYDYMPNGSL DKYLNRSENQ ERLTWEQRFR IIKDVATALL HLHQEWVQVI IHRDIKPANV LIDNEMNARL GDFGLAKLYD QGFDPETSKV
501: AGTFGYIAPE FLRTGRATTS TDVYAFGLVM LEVVCGRRII ERRAAENEEY LVDWILELWE NGKIFDAAEE SIRQEQNRGQ VELVLKLGVL CSHQAASIRP
601: AMSVVMRILN GVSQLPDNLL DVVRAEKFRE WPETSMELLL LDVNTSSSLE LTDSSFVSHG R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)