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AT3G59680.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZ9HeggNOG:ENOG410YJZYEMBL:AK222085EMBL:AL138659
EMBL:BT014782EMBL:BT015008EMBL:CP002686EnsemblPlants:AT3G59680
EnsemblPlants:AT3G59680.1entrez:825137ExpressionAtlas:Q9M1A0GeneID:825137
Gramene:AT3G59680.1hmmpanther:PTHR36772hmmpanther:PTHR36772:SF1HOGENOM:HOG000240891
KEGG:ath:AT3G59680PhylomeDB:Q9M1A0PIR:T49309Proteomes:UP000006548
RefSeq:NP_191527.3TAIR:AT3G59680UniGene:At.22978UniProt:Q9M1A0
Coordinates (TAIR10) chr3:+:22045218..22045823
Molecular Weight (calculated) 23194.30 Da
IEP (calculated) 11.21
GRAVY (calculated) -0.68
Length 201 amino acids
Sequence (TAIR10)
(BLAST)
001: MCECDIKKVM ANRKPWYQRA MAVARFATNW RTIPKSSSQQ QPENFRPSRN PSVNSKSSNH NQIYHQLRKC SSLKVAANSF TRVCLCAPIG PYDDVFRIHV
101: PPRRSSSYPP SKPLPMETAV AVATARMSVD SGRRIFRGKS LRENALMRRF VVAEEEAIME NRKRDQMEIV RKRNQMRRKK KLGPSPLSRM VIAEDQEVCL
201: L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)