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AT3G57620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.804
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glyoxal oxidase-related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G14430.1); Has 876 Blast hits to 857 proteins in 171 species: Archae - 0; Bacteria - 347; Metazoa - 2; Fungi - 241; Plants - 265; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHN3eggNOG:ENOG41110V0EMBL:AL049660EMBL:CP002686EnsemblPlants:AT3G57620EnsemblPlants:AT3G57620.1entrez:824931
Gene3D:2.130.10.80Gene3D:2.60.40.10GeneID:824931Gramene:AT3G57620.1hmmpanther:PTHR32208hmmpanther:PTHR32208:SF18HOGENOM:HOG000239926
InterPro:IPR009880InterPro:IPR011043InterPro:IPR013783InterPro:IPR014756InterPro:IPR015202InterPro:IPR015916KEGG:ath:AT3G57620
OMA:IPSSAAWPfam:PF07250Pfam:PF09118PhylomeDB:Q9SVX6PIR:T06758Proteomes:UP000006548RefSeq:NP_191321.1
SMR:Q9SVX6STRING:3702.AT3G57620.1SUPFAM:0047741SUPFAM:SSF50965SUPFAM:SSF81296TAIR:AT3G57620UniGene:At.53968
UniProt:Q9SVX6
Coordinates (TAIR10) chr3:+:21337564..21339207
Molecular Weight (calculated) 61029.00 Da
IEP (calculated) 6.19
GRAVY (calculated) -0.10
Length 547 amino acids
Sequence (TAIR10)
(BLAST)
001: MINSKNTFIV ATTILCLSMA ILSEGQANPF LLQLDRWEML LPSIGISAMH MQLLHNGMVI MFDRTDFGTS NVSLPGGICR YDPTDTAEKF DCSAHSVLYD
101: VVSNTYRPLN VQTDTWCSSG AVLPNGTLVQ TGGYNDGERA ARMFSPCGYS DTCDWIEFPQ YLSQRRWYAT NQILPDGRII VVGGRRQFNY ELFPRHDSRS
201: RSSRLEFLRE TSDGSNENNL YPFIHLLPDG NLFVFANTRS IVFDYKKNRI VKEFPEIPGG DPRNYPSSGS SILFPLDDTN DANVEVEIMV CGGSPKGGFS
301: RGFTRATSTC GRLKLSDQSP SWEMETMPLP RVMGDMLLLP TGDVIIVNGA GAGTAGWEKA RDPIIQPVIY QPFDHLFTVM STPSRPRMYH SSAILLPDGR
401: VLVGGSNPHV YYNFTNVEYP TDLSLEAYSP PYLFFTSDPI RPKILLTSDK VLSYKRLFNV DFSIAQFLTV DLLSVRIVAP SFTTHSFAMN QRMVILKLLS
501: VTRDQLTNSY RVSALGPSTA EIAPPGYYMI FLVHAGIPSS AAWVQIE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)