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AT3G57340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G05750.1); Has 24356 Blast hits to 24336 proteins in 3323 species: Archae - 190; Bacteria - 9449; Metazoa - 4326; Fungi - 2357; Plants - 2505; Viruses - 22; Other Eukaryotes - 5507 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:AK317231EMBL:AL137080
EMBL:CP002686EnsemblPlants:AT3G57340EnsemblPlants:AT3G57340.1EnsemblPlants:AT3G57340.2
entrez:824901Gene3D:1.10.287.110GeneID:824901GO:GO:0005886
Gramene:AT3G57340.1Gramene:AT3G57340.2hmmpanther:PTHR24078InterPro:IPR001623
InterPro:IPR015399InterPro:IPR018253KEGG:ath:AT3G57340KO:K09518
OMA:FQCLSNDPfam:PF00226Pfam:PF09320Pfscan:PS50076
PhylomeDB:Q9M2L3PIR:T45812PRINTS:PR00625PROSITE:PS00636
PROSITE:PS50076Proteomes:UP000006548RefSeq:NP_191293.1RefSeq:NP_850714.1
scanprosite:PS00636SMART:SM00271SMR:Q9M2L3STRING:3702.AT3G57340.1
SUPFAM:SSF46565TAIR:AT3G57340UniGene:At.28594UniGene:At.53966
UniGene:At.71789UniProt:Q9M2L3
Coordinates (TAIR10) chr3:+:21219175..21220278
Molecular Weight (calculated) 41322.20 Da
IEP (calculated) 9.01
GRAVY (calculated) -0.81
Length 367 amino acids
Sequence (TAIR10)
(BLAST)
001: MDGNKDDALK CLKICKSAME AGDRPRALKF LAKARRLDPN LPIDDLVSEL NNNKSDEPGS AKSPGSAAAK DSSNSSDRPS LRQRGSSTTS SSSSMSYTEE
101: QISIVRKIKS KKDYYEILGL ESNCSVDDVR KAYRKLSLKV HPDKNQAPGS EEAFKSVSKA FQCLSNDEAR KKYDVSGSDE PIYQPRRSAR SNGFNGGYYY
201: EDEFDPNEIF RSFFGGGGFG GGGMPPATAQ FRSFNFGATR QRTANNNQAP DAGFNARILL QLLPVVFILL LNFMPSSQPV YQLSATYPYQ YKFTTQKGVN
301: YFVKSSKFEQ DYPRDSNDRH TLEEQVERDY VSILSQNCRY EMQRKQWGFV RETPHCDMMR RFDTAAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)