AT3G56870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 204 Blast hits to 201 proteins in 58 species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi - 8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:21053077..21055518 | ||||||||||||||||||||
| Molecular Weight (calculated) | 79625.30 Da | ||||||||||||||||||||
| IEP (calculated) | 5.01 | ||||||||||||||||||||
| GRAVY (calculated) | -0.79 | ||||||||||||||||||||
| Length | 700 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVELRSSTHL NSHVHYIRTI KDGSIKIVMN MDGRRKPKLK FRQLVDIYNL EDSQGVESIP RVVRDLDNGS DFTQGSESED FSMTTLEMIQ KQCKERKRKL 101: RNCRDTTTET FSNVEVKKEY VTQDEGCDIE EPLSSWDTKF SKRRKKKQER KKAKCGTSTS SPPSVEKVDL PLVLFHVKPE VWDDSYSVSE AMDCSEKSES 201: PINTVLVEEI MLDSSSDMRL VPYCSAEPNF PGVVAIEEAF EDASEEFSDA DFQNKQIVLY SSVSREEMEL DVNPQHSEYE NIGCVKNFIS AYTSSGCEEE 301: DKEDEESNDI KANLDMSVTG LEIVKIEAPE ILAIDYPGCL SIINFCAEDS EIVWETEDIT KDNFPEATDI LQLTNCCNSL DNLQPVPEDS TSSKEEDHLT 401: ERLQQSLYSK HEDEAGDHKL SQLYKEPDEV QKVAETDSIQ QQQPHHQPEN LLSGRKALSP TSQEKLRKAM EHPDSPEKRS KKSRGKLYFS SQNSHRILKA 501: QGLDNIDRVE IIPSSKQAIQ KATNNTRQMK YQRATHKFPR RNTQAAKAQP FSTGGTSIQG CSQKAIAFSQ GQMRDFQNVA ARLTKELKSM RQITKRCLQA 601: ESNTSNMSDC NLDEVKTVIG NAEKTEESCK KWLSIIERDC NRFCKLMSMV REDSPATENI VHKKKKIRFA DDAGGDLCHV KVFEIDLESE SYVITKDCKI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)