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AT3G56850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ABA-responsive element binding protein 3
Curator
Summary (TAIR10)
Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.
Computational
Description (TAIR10)
ABA-responsive element binding protein 3 (AREB3); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G41070.2); Has 2031 Blast hits to 1971 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 29; Plants - 1672; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Protein Annotations
BioGrid:10168eggNOG:ENOG410IFYNeggNOG:ENOG410YFZJEMBL:AB017162EMBL:AF334208EMBL:AL390921EMBL:AY062448
EMBL:AY081670EMBL:CP002686EnsemblPlants:AT3G56850EnsemblPlants:AT3G56850.1entrez:824852GeneID:824852Genevisible:Q9LES3
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009737GO:GO:0009738GO:GO:0043565Gramene:AT3G56850.1
hmmpanther:PTHR22952hmmpanther:PTHR22952:SF137HOGENOM:HOG000237278InParanoid:Q9LES3IntAct:Q9LES3InterPro:IPR004827iPTMnet:Q9LES3
KEGG:ath:AT3G56850KO:K14432ncoils:CoilOMA:QRGSMQGPaxDb:Q9LES3Pfam:PF00170Pfam:Q9LES3
Pfscan:PS50217PhylomeDB:Q9LES3PIR:T51273PRIDE:Q9LES3PRO:PR:Q9LES3PROSITE:PS00036PROSITE:PS50217
ProteinModelPortal:Q9LES3Proteomes:UP000006548RefSeq:NP_191244.1scanprosite:PS00036SMART:SM00338SMR:Q9LES3STRING:3702.AT3G56850.1
SUPFAM:SSF57959TAIR:AT3G56850tair10-symbols:AREB3tair10-symbols:DPBF3UniGene:At.5357UniProt:Q9LES3
Coordinates (TAIR10) chr3:-:21046554..21047894
Molecular Weight (calculated) 32420.50 Da
IEP (calculated) 9.95
GRAVY (calculated) -0.75
Length 297 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)