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AT3G56760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1); Has 115971 Blast hits to 114244 proteins in 3013 species: Archae - 152; Bacteria - 14469; Metazoa - 43130; Fungi - 12702; Plants - 24192; Viruses - 490; Other Eukaryotes - 20836 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G56760-MONOMEREC:2.7.11.1eggNOG:ENOG410XRMJeggNOG:KOG0032
EMBL:AL390921EMBL:CP002686EnsemblPlants:AT3G56760EnsemblPlants:AT3G56760.1
entrez:824843Gene3D:1.10.238.10GeneID:824843Genevisible:Q9LET1
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0016020
GO:GO:0046872Gramene:AT3G56760.1hmmpanther:PTHR24349hmmpanther:PTHR24349:SF92
HOGENOM:HOG000233030InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR011992InterPro:IPR017441iPTMnet:Q9LET1KEGG:ath:AT3G56760
KO:K00924ncoils:CoilOMA:TYLQEQFPaxDb:Q9LET1
Pfam:PF00069Pfam:Q9LET1Pfscan:PS50011PhylomeDB:Q9LET1
PIR:T51264PRIDE:Q9LET1PRO:PR:Q9LET1PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9LET1Proteomes:UP000006548
RefSeq:NP_191235.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9LET1STRING:3702.AT3G56760.1SUPFAM:SSF47473SUPFAM:SSF56112
TAIR:AT3G56760UniGene:At.34902UniProt:Q9LET1
Coordinates (TAIR10) chr3:-:21020661..21023756
Molecular Weight (calculated) 64550.80 Da
IEP (calculated) 8.91
GRAVY (calculated) -0.25
Length 577 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLCHGKPIE QQSKNLPISN EIEETPKNSS QKAKSSGFPF YSPSPLPSLF KTSPAVSSSS VSSTPLRIFK RPFPPPSPAK HIRALLARRH GSVKPNEASI
101: PEGSECEVGL DKKFGFSKQF ASHYEIDGEV GRGHFGYTCS AKGKKGSLKG QDVAVKVIPK SKMTTAIAIE DVRREVKILR ALTGHKNLVQ FYDAFEDDEN
201: VYIVMELCQG GELLDKILQR GGKYSEVDAK KVMIQILSVV AYCHLQGVVH RDLKPENFLF TTKDESSPLK AIDFGLSDYV RPDERLNDIV GSAYYVAPEV
301: LHRTYGTEAD MWSIGVIAYI LLCGSRPFWA RSESGIFRAV LKAEPNFEEA PWPSLSPDAV DFVKRLLNKD YRKRLTAAQA LCHPWLVGSH ELKIPSDMII
401: YKLVKVYIMS SSLRKSALAA LAKTLTVPQL TYLQEQFNLL GPSKNGYISM QNYKTAILKS STEATKDSRV LDFVHMISCL QYKKLDFEEF CASALSVYQL
501: EAMETWEQHA RRAYELYEKD GNRVIMIEEL ATELGLGPSV PVHVVLQDWI RHSDGKLSFL GFVRLLHGVS SRTLQKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)