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AT3G56480.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.396
cytosol 0.376
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myosin heavy chain-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
myosin heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40820.1); Has 486 Blast hits to 458 proteins in 133 species: Archae - 0; Bacteria - 70; Metazoa - 142; Fungi - 25; Plants - 111; Viruses - 1; Other Eukaryotes - 137 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKQJeggNOG:ENOG410XTBSEMBL:AK118517EMBL:AL163972EMBL:BT005893EMBL:CP002686EnsemblPlants:AT3G56480
EnsemblPlants:AT3G56480.1entrez:824815GeneID:824815Genevisible:Q8GX05GO:GO:0005737GO:GO:0005856GO:GO:0005886
GO:GO:0007623Gramene:AT3G56480.1hmmpanther:PTHR31172hmmpanther:PTHR31172:SF3HOGENOM:HOG000242482InterPro:IPR032009InterPro:IPR032012
InterPro:IPR032015iPTMnet:Q8GX05KEGG:ath:AT3G56480OMA:FILTFESPaxDb:Q8GX05Pfam:PF16709Pfam:PF16711
Pfam:PF16712Pfam:Q8GX05PhylomeDB:Q8GX05PIR:T49049PRIDE:Q8GX05PRO:PR:Q8GX05ProteinModelPortal:Q8GX05
Proteomes:UP000006548RefSeq:NP_191207.2SMR:Q8GX05TAIR:AT3G56480UniGene:At.19875UniProt:Q8GX05
Coordinates (TAIR10) chr3:-:20936480..20938986
Molecular Weight (calculated) 54921.60 Da
IEP (calculated) 7.04
GRAVY (calculated) -0.49
Length 490 amino acids
Sequence (TAIR10)
(BLAST)
001: MTKVCPEIEG TLSLSVVPVS VDVSFASDHF PTYKLGPDNQ IVEEPKEDEK GPSVKETVEK ESELLSDQHK RLSVRDLASK FDKNLAAAVS LANEAKLREV
101: ASLEGHVMLK KLRDALEYMR GRTDGQNKQD VETAISMVEA LAVKLTQNEG ELIQEKFEVK KLGNFLKQTS EDAKKLVNQE KSFSCAEIET ARAVVLRLGE
201: AFEEQERISE ASRAQGPDVE KLVEEVQEAR QIKRMHHPTK VMGMQHELHG LRNRIQEKYM NSVKLHKEIA IIKRVEESKS CPFVLEGKQS LGSCLRIRVN
301: AQDNAPDLSN CSIQWYRAAC ETSRREAISG AIQSMYAPEP FDVGRILQAD ILSNGQKFTV TTDDPVDPDS GLPSRVESLM RKSNSEFSVV ISQMNGQDYA
401: SRSHVFTVGK TRIKLSRGWI TKARELYSTS MQLCGVRGNI KAPTKAVFWQ PRKSLTFILT FESEHERNAA IALARKYAFD CSVTLLGPDD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)