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AT3G56410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.934
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF3133)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT5G05190.1); Has 4900 Blast hits to 3562 proteins in 473 species: Archae - 21; Bacteria - 563; Metazoa - 1503; Fungi - 393; Plants - 371; Viruses - 54; Other Eukaryotes - 1995 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111M3TeggNOG:KOG1181EMBL:CP002686EnsemblPlants:AT3G56410EnsemblPlants:AT3G56410.1entrez:824808ExpressionAtlas:F4IZF5
GeneID:824808Gramene:AT3G56410.1hmmpanther:PTHR31105hmmpanther:PTHR31105:SF3InterPro:IPR021480iPTMnet:F4IZF5ncoils:Coil
PaxDb:F4IZF5Pfam:PF11331PRIDE:F4IZF5ProteinModelPortal:F4IZF5Proteomes:UP000006548RefSeq:NP_850709.1STRING:3702.AT3G56410.2
TAIR:AT3G56410UniGene:At.34938UniProt:F4IZF5
Coordinates (TAIR10) chr3:-:20916320..20920877
Molecular Weight (calculated) 169416.00 Da
IEP (calculated) 4.36
GRAVY (calculated) -1.00
Length 1488 amino acids
Sequence (TAIR10)
(BLAST)
0001: MFRGMRSRTV PGLSSQSRIV RCPKCHKLLQ EPLDATSYKC GGCDSILHAK RWEPDGNDHT NTIPEALLSS QNRSLSAEVE SPEDGSRTPM RTTHREYNSR
0101: PSTSVERGYH PETVYKPETS DIRREWMRRT DDFSETGDSD VFTSERSSPY NTRSNAAQWA QHEGRYADPP RVPFYPASPS PSSAYEYGYS SPFHGSYVSA
0201: SEQSYYHQQP NQFEQYSREG WFQESSVASP TRFPGETSDG KYYHRSSQSQ LHDLQYHNLY EPSRSETPHH SVYSERSYVP AAAPHRSTYS EHSVGISKSD
0301: TSSEKSILRN KKRYVRERNP VVKRHILPSA GGAPFATCSY CLELLQLPQV SPQGKRQRYQ VRCGSCSGVL KFSIREKADT VLDSPSFVDY GMDFADETVT
0401: NHQDSASEGH EEINPDGSHL TCLDDDSGET ICKSNDAVIL SQKILETFED KGIKEDIRNI STKFLDLKLE ALQPHLKPMG NRRLSEQQPT SSETIGETSK
0501: IHLEQSQEAH SEKSTEMDNN ICDIEEPEYE KNEIIKPEEI VGEGSGESLE VPVNQNERMS ESSEEDERVA ERSVSHSEEL LYKKEYVSET RVQSENTGDT
0601: YEFEWEETQE TEEYEGESTL EEIGDKPQLH LDKSRYTRDS ICDSSLSYGE PFEDTSVKED TEHISNTISD AKSATTHSPL NSLVNENQRF IGHLDQSGEA
0701: TVTISRIQEH SKYEYENLSE RQELEMTISD RVTCKLEESR YETNETLEPS KVGEDGSLVS FEKVSEAFET IIEGKTGEER LVSHQMDSPN ENVENSYGTL
0801: EPVYLEESGF AGERTWEGTI EDRAGLHLEE YESNYENYSR PFEWTSETAP TFRMHDYELG TILEPDEYAD GRSESSSRGS FNDDGGSEER VVFHESQVAI
0901: PEQSHYEYEN SSKRQELSDT VFDIARSELQ EYRYERNETL EPSKMVGDGS VVPVEKAGET FISKKNEDSS VSHQMESQNE DMENSYGTKE PVYPEGSRCE
1001: SENSWAETMG DGAGLKLEEY NSNPFEWTSE KAAAFHLHEY ERWTVPEPEE DANERSITSS RDSFNDHENL KGIAVSHEEE PWLVDENRTE ALKVGVMVED
1101: EPSLHLTKFE NETMKLEETL EWTSERAPTF RLPEYELGEM LESDNDVDER SEYSSKGSFN DHEIPRELLN EEDPQLVIDG RTEAVQVGEM AKDTVSLHLE
1201: ECGNESMKLD ETFEWTSGRT LTFRRHGYEV ETKLEADEDA DGRSESSSRG SFNDRGSSKE RAVLHEDGSW LVDDYETKAL KVGVMAEDGS SLQLEKGENG
1301: KMDLDETLEP RDDIFRLSLD DTLEQERMTF HLKMSQDKQE SLRQTFKQGD AEKDSDVFSE GHEFPSKMAE LDSDTEEEIV EEQLEHLQKE NEKLSLTFEQ
1401: HDHIYSTTEP SEIVGLRHAL YQTQNSPLRS PLTSPIHTPI GSPLHYLMAS QIRSPIASTM HSHIVSPLRS PINSSGSLSD VLFFSKKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)