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AT3G56370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.974
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G01890.1); Has 218234 Blast hits to 138588 proteins in 4594 species: Archae - 166; Bacteria - 19582; Metazoa - 73931; Fungi - 10568; Plants - 87830; Viruses - 425; Other Eukaryotes - 25732 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G56370-MONOMEREC:2.7.11.1eggNOG:COG4886eggNOG:ENOG410IG0XEMBL:AB076906EMBL:AB076907EMBL:AL163972
EMBL:AY070033EMBL:CP002686EMBL:FJ708741EnsemblPlants:AT3G56370EnsemblPlants:AT3G56370.1entrez:824804Gene3D:3.80.10.10
GeneID:824804Genevisible:Q9LY03GO:GO:0004672GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT3G56370.1
hmmpanther:PTHR27000hmmpanther:PTHR27000:SF197InParanoid:Q9LY03IntAct:Q9LY03InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611
InterPro:IPR003591InterPro:IPR011009InterPro:IPR013210InterPro:IPR017441InterPro:IPR032675iPTMnet:Q9LY03KEGG:ath:AT3G56370
OMA:QSNIIHYPaxDb:Q9LY03Pfam:PF00560Pfam:PF07714Pfam:PF08263Pfam:PF13516Pfam:PF13855
Pfscan:PS50011Pfscan:PS51450PhylomeDB:Q9LY03PIR:T49038PRIDE:Q9LY03PRO:PR:Q9LY03PROSITE:PS00107
PROSITE:PS50011PROSITE:PS51450ProteinModelPortal:Q9LY03Proteomes:UP000006548RefSeq:NP_191196.1scanprosite:PS00107SMART:SM00369
SMR:Q9LY03STRING:3702.AT3G56370.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT3G56370TMHMM:TMhelixUniGene:At.27880
UniProt:Q9LY03
Coordinates (TAIR10) chr3:-:20899403..20902390
Molecular Weight (calculated) 103860.00 Da
IEP (calculated) 6.85
GRAVY (calculated) 0.01
Length 964 amino acids
Sequence (TAIR10)
(BLAST)
001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)