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AT3G55800.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : sedoheptulose-bisphosphatase
Curator
Summary (TAIR10)
Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.
Computational
Description (TAIR10)
sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G55800-MONOMERBioGrid:10062EC:3.1.3.37eggNOG:COG0158eggNOG:KOG1458EMBL:AL161667EMBL:AY054669
EMBL:AY128737EMBL:CP002686EMBL:S74719EnsemblPlants:AT3G55800EnsemblPlants:AT3G55800.1entrez:824746GeneID:824746
Genevisible:P46283GO:GO:0005986GO:GO:0009507GO:GO:0009570GO:GO:0009579GO:GO:0009941GO:GO:0016051
GO:GO:0016311GO:GO:0019252GO:GO:0019253GO:GO:0042132GO:GO:0042742GO:GO:0046872GO:GO:0048046
GO:GO:0050278Gramene:AT3G55800.1gramene_pathway:3.1.3.37gramene_pathway:CALVIN-PWYgramene_plant_reactome:1119519gramene_plant_reactome:6877183HAMAP:MF_01855
hmmpanther:PTHR11556hmmpanther:PTHR11556:SF2HOGENOM:HOG000191263InParanoid:P46283IntAct:P46283InterPro:IPR000146InterPro:IPR020548
InterPro:IPR023079InterPro:IPR033391iPTMnet:P46283KEGG:00010+3.1.3.11KEGG:00030+3.1.3.11KEGG:00051+3.1.3.11KEGG:00680+3.1.3.11
KEGG:00710+3.1.3.11KEGG:ath:AT3G55800KO:K01100OMA:HEKSECYPANTHER:PTHR11556PaxDb:P46283Pfam:P46283
Pfam:PF00316PhylomeDB:P46283PIR:S51838PRIDE:P46283PRINTS:PR01958PRO:PR:P46283ProMEX:P46283
PROSITE:PS00124ProteinModelPortal:P46283Proteomes:UP000006548RefSeq:NP_191139.1scanprosite:PS00124SMR:P46283STRING:3702.AT3G55800.1
SUPFAM:SSF56655SWISS-2DPAGE:P46283TAIR:AT3G55800tair10-symbols:SBPASEUniGene:At.21157UniPathway:UPA00116unipathway:UPA00138
UniProt:P46283World-2DPAGE:0003:P46283
Coordinates (TAIR10) chr3:+:20709640..20711421
Molecular Weight (calculated) 42416.70 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.11
Length 393 amino acids
Sequence (TAIR10)
(BLAST)
001: METSIACYSR GILPPSVSSQ RSSTLVSPPS YSTSSSFKRL KSSSIFGDSL RLAPKSQLKA TKAKSNGAST VTKCEIGQSL EEFLAQATPD KGLRTLLMCM
101: GEALRTIAFK VRTASCGGTA CVNSFGDEQL AVDMLADKLL FEALQYSHVC KYACSEEVPE LQDMGGPVEG GFSVAFDPLD GSSIVDTNFT VGTIFGVWPG
201: DKLTGITGGD QVAAAMGIYG PRTTYVLAVK GFPGTHEFLL LDEGKWQHVK ETTEIAEGKM FSPGNLRATF DNSEYSKLID YYVKEKYTLR YTGGMVPDVN
301: QIIVKEKGIF TNVTSPTAKA KLRLLFEVAP LGLLIENAGG FSSDGHKSVL DKTIINLDDR TQVAYGSKNE IIRFEETLYG TSRLKNVPIG VTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)