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AT3G55270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.862
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : mitogen-activated protein kinase phosphatase 1
Curator
Summary (TAIR10)
MAP kinase phosphatase (MKP1)
Computational
Description (TAIR10)
mitogen-activated protein kinase phosphatase 1 (MKP1); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3); Has 4115 Blast hits to 4050 proteins in 297 species: Archae - 2; Bacteria - 48; Metazoa - 2335; Fungi - 439; Plants - 312; Viruses - 98; Other Eukaryotes - 881 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G55270-MONOMERBioGrid:10009EC:3.1.3.48eggNOG:COG2453eggNOG:KOG1716EMBL:AF312745EMBL:AL132954
EMBL:AY054509EMBL:CP002686EnsemblPlants:AT3G55270EnsemblPlants:AT3G55270.1entrez:824693Gene3D:3.40.20.10Gene3D:3.90.190.10
GeneID:824693Genevisible:Q9C5S1GO:GO:0000188GO:GO:0004725GO:GO:0005829GO:GO:0006952GO:GO:0009651
GO:GO:0010224GO:GO:0010225GO:GO:0017017Gramene:AT3G55270.1hmmpanther:PTHR10159hmmpanther:PTHR10159:SF339InParanoid:Q9C5S1
InterPro:IPR000340InterPro:IPR000387InterPro:IPR016130InterPro:IPR020422InterPro:IPR024950InterPro:IPR029006InterPro:IPR029021
iPTMnet:Q9C5S1KEGG:ath:AT3G55270OMA:IFVHCCQPANTHER:PTHR10159PaxDb:Q9C5S1Pfam:PF00782Pfam:Q9C5S1
Pfscan:PS50054Pfscan:PS50056PhylomeDB:Q9C5S1PIR:T47666PRIDE:Q9C5S1PRO:PR:Q9C5S1PROSITE:PS00383
PROSITE:PS50054PROSITE:PS50056ProteinModelPortal:Q9C5S1Proteomes:UP000006548Reactome:R-ATH-202670RefSeq:NP_567018.4scanprosite:PS00383
SMART:SM00195SMR:Q9C5S1STRING:3702.AT3G55270.1SUPFAM:SSF52799SUPFAM:SSF55753TAIR:AT3G55270tair10-symbols:ATMKP1
tair10-symbols:MKP1UniGene:At.21664UniProt:Q9C5S1
Coordinates (TAIR10) chr3:+:20496775..20499408
Molecular Weight (calculated) 85968.50 Da
IEP (calculated) 6.73
GRAVY (calculated) -0.38
Length 784 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGREDAMGN DEAPPGSKKM FWRSASWSAS RTASQVPEGD EQSLNIPCAI SSGPSRRCPA APLTPRSHHN SKARACLPPL QPLAISRRSL DEWPKAGSDD
101: VGEWPHPPTP SGNKTGERLK LDLSSTQQRV TDKSSGLAKR EKIAFFDKEC SKVADHIYVG GDAVAKDKSI LKNNGITHIL NCVGFICPEY FKSDFCYRSL
201: WLQDSPSEDI TSILYDVFDY FEDVREQSGR IFVHCCQGVS RSTSLVIAYL MWREGQSFDD AFQYVKSARG IADPNMGFAC QLLQCQKRVH AFPLSPTSLL
301: RMYKMSPHSP YDPLHLVPKL LNDPCPGSLD SRGAFIIQLP SAIYIWVGRQ CETIMEKDAK AAVCQIARYE KVEAPIMVVR EGDEPVYYWD AFASILPMIG
401: GSVIKVQPGD RKVDAYNLDF EIFQKAIEGG FVPTLASSNN EHETHLPARE NSWSSLKCKF ASRFDKGFRY VSKTPLSRVY SDSMMIVHSS GSPSSTTSSS
501: STASPPFLSP DSVCSTNSGN SLKSFSQSSG RSSLRPSIPP SLTLPKFSSL SLLPSQTSPK ESRGVNTFLQ PSPNRKASPS LAERRGSLKG SLKLPGLADS
601: NRGTPAFTLH PDDSNDIVFN LEGIRNGDLY PPSDCKGTSV DSDLPEKEII SLISCSKSDR HKSGGDTDSS GQPLACRWPS MEMITKLSRA YLDSESVIAI
701: PLPSDAVGET GSRNLYIWIG KSFSLDNNCS LVDSNKAADT VENVDWVQIG ESILCQMDLP KDTPIKIVRE SEDQTELLAL LSAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)