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AT3G55000.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:17317660 (2007): plasma membrane
FP Images

7-day old Arabidopsis seedling (no marker)

RFP-At3g55000
(full-length)
overlay

SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : tonneau family protein
Curator
Summary (TAIR10)
Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2.
Computational
Description (TAIR10)
TONNEAU 1A (TON1A); INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FGFR1 oncogene partner (FOP), N-terminal dimerisation domain (InterPro:IPR018993), LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau 1b (TON1b) (TAIR:AT3G55005.1); Has 229 Blast hits to 226 proteins in 73 species: Archae - 0; Bacteria - 3; Metazoa - 122; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Protein Annotations
BioGrid:9981eggNOG:ENOG410IKR6eggNOG:ENOG410Y1GNEMBL:AF280058EMBL:AK117295EMBL:AL049655EMBL:BT024487
EMBL:CP002686EnsemblPlants:AT3G55000EnsemblPlants:AT3G55000.1entrez:824665GeneID:824665Genevisible:Q9FQ25GO:GO:0000226
GO:GO:0000913GO:GO:0005737GO:GO:0005886GO:GO:0005938GO:GO:0009574GO:GO:0030863GO:GO:0030865
GO:GO:0030981Gramene:AT3G55000.1hmmpanther:PTHR15431InParanoid:Q9FQ25IntAct:Q9FQ25InterPro:IPR006594iPTMnet:Q9FQ25
KEGG:ath:AT3G55000KO:K16546ncoils:CoilOMA:FLKFESMPaxDb:Q9FQ25Pfam:PF16045Pfam:Q9FQ25
Pfscan:PS50896PhylomeDB:Q9FQ25PRIDE:Q9FQ25PRO:PR:Q9FQ25PROSITE:PS50896ProteinModelPortal:Q9FQ25Proteomes:UP000006548
RefSeq:NP_567012.1SMR:Q9FQ25STRING:3702.AT3G55000.1TAIR:AT3G55000tair10-symbols:TON1tair10-symbols:TON1AUniGene:At.35062
UniProt:Q9FQ25
Coordinates (TAIR10) chr3:+:20381612..20383577
Molecular Weight (calculated) 29335.90 Da
IEP (calculated) 5.14
GRAVY (calculated) -0.95
Length 260 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDYTREMMD LKTLVTRTLE KKGVLAKIRA ELRASVFEAI EEEDRVIENN EGPPPALLGS CNDRARKLHA SPSGRLLSAL ICEYLDWAQL NHTLIVYQPE
101: SNLPKDSWKS ELRDFNSNNG FELNRNGDSG PLLLDVLEGF LKFESMTQGM GSSSRRDSET ESSSSLESRN PPRRSSASDS LPPQRRPVSA SQASDRRAGL
201: STSGYRKDEF NWRQGNQDTH EEVTRASAAL ENLQLDRKTR NLTSSWRNVR DGTNEEEGRD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)