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AT3G54660.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:21539947 (2011): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18433418 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:17137349 (2006): mitochondrion
  • PMID:16207701 (2006): plastid
  • PMID:15028209 (2004): plastid
  • PMID:12954611 (2003): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione reductase
Curator
Summary (TAIR10)
Encodes glutathione reductase that is most likely localized in the chloroplast.
Computational
Description (TAIR10)
glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1249eggNOG:KOG0405EMBL:BT020536EMBL:BT030335EnsemblPlants:AT3G54660EnsemblPlants:AT3G54660.1entrez:824631
ExpressionAtlas:Q5FV38Gene3D:3.30.390.30Gene3D:3.50.50.60GeneID:824631GO:GO:0004362GO:GO:0005623GO:GO:0006749
GO:GO:0045454GO:GO:0050660GO:GO:0050661Gramene:AT3G54660.1gramene_plant_reactome:1119437gramene_plant_reactome:6874671hmmpanther:PTHR22912
hmmpanther:PTHR22912:SF135InterPro:IPR004099InterPro:IPR006324InterPro:IPR012999InterPro:IPR016156InterPro:IPR023753KEGG:00480+1.8.1.7
KEGG:ath:AT3G54660KO:K00383OMA:YIERIHAPfam:P42770Pfam:PF02852Pfam:PF07992PhylomeDB:P42770
PhylomeDB:Q5FV38PROSITE:PS00076RefSeq:NP_191026.1scanprosite:PS00076SMR:Q5FV38STRING:3702.AT3G54660.1SUPFAM:SSF51905
SUPFAM:SSF55424TAIR:AT3G54660tair10-symbols:ATGR2tair10-symbols:EMB2360tair10-symbols:GRTIGRfam:TIGR01424TIGRFAMs:TIGR01424
UniGene:At.21776UniProt:P42770UniProt:Q5FV38
Coordinates (TAIR10) chr3:-:20230356..20233100
Molecular Weight (calculated) 60855.60 Da
IEP (calculated) 7.98
GRAVY (calculated) -0.14
Length 565 amino acids
Sequence (TAIR10)
(BLAST)
001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)