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AT3G54620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic leucine zipper 25
Curator
Summary (TAIR10)
bZIP transcription factor-like protein mRNA
Computational
Description (TAIR10)
basic leucine zipper 25 (BZIP25); FUNCTIONS IN: protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT4G02640.2); Has 2261 Blast hits to 2259 proteins in 207 species: Archae - 2; Bacteria - 16; Metazoa - 141; Fungi - 138; Plants - 1903; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Protein Annotations
BioGrid:9943eggNOG:ENOG410JBKVeggNOG:ENOG4111CHPEMBL:AJ010860EMBL:AL138656EMBL:AY054645EMBL:AY057509
EMBL:AY081494EMBL:CP002686EnsemblPlants:AT3G54620EnsemblPlants:AT3G54620.1entrez:824627GeneID:824627Genevisible:Q9M1G6
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0043565GO:GO:0045735GO:GO:0045893GO:GO:0046982
GO:GO:2000693hmmpanther:PTHR22952hmmpanther:PTHR22952:SF127HOGENOM:HOG000240492InParanoid:Q9M1G6IntAct:Q9M1G6InterPro:IPR004827
InterPro:IPR020983iPTMnet:Q9M1G6KEGG:ath:AT3G54620ncoils:CoilOMA:YTFLESFPaxDb:Q9M1G6Pfam:PF00170
Pfam:PF12498Pfam:Q9M1G6Pfscan:PS50217PhylomeDB:Q9M1G6PIR:T47621PRIDE:Q9M1G6PRO:PR:Q9M1G6
PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:Q9M1G6Proteomes:UP000006548RefSeq:NP_001118838.1RefSeq:NP_001190091.1RefSeq:NP_567003.2
scanprosite:PS00036SMART:SM00338SMR:Q9M1G6STRING:3702.AT3G54620.1SUPFAM:SSF57959TAIR:AT3G54620tair10-symbols:ATBZIP25
tair10-symbols:BZIP25tair10-symbols:BZO2H4UniGene:At.1468UniProt:Q9M1G6
Coordinates (TAIR10) chr3:-:20218085..20220341
Molecular Weight (calculated) 44333.00 Da
IEP (calculated) 6.60
GRAVY (calculated) -0.89
Length 403 amino acids
Sequence (TAIR10)
(BLAST)
001: MHIVFSVDDL TESFWPVPAP APSPGSSSTP SPTQNVADGM TRSQSEWAFH RLINELSGSD SSPTTNTIER SPPPVQSLSR LEETVDETED VVEIQKPQNH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)