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AT3G54180.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.953
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

7-day old Arabidopsis seedling (no marker)

RFP-At3g54180
(full-length)
overlay

SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cyclin-dependent kinase B1;1
Curator
Summary (TAIR10)
Arabidopsis homolog of yeast cdc2, a protein kinase (cyclin-dependent kinase) that plays a central role in control of the mitotic cell cycle.
Computational
Description (TAIR10)
cyclin-dependent kinase B1;1 (CDKB1;1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 100146 Blast hits to 99045 proteins in 2954 species: Archae - 92; Bacteria - 10121; Metazoa - 38796; Fungi - 11639; Plants - 20773; Viruses - 421; Other Eukaryotes - 18304 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G54180-MONOMERBioGrid:9902BRENDA:2.7.11.22EC:2.7.11.22
EC:2.7.11.23eggNOG:ENOG410XPP3eggNOG:KOG0594EMBL:AL132957
EMBL:AY084810EMBL:BT026079EMBL:CP002686EMBL:D10851
EMBL:X57840EnsemblPlants:AT3G54180EnsemblPlants:AT3G54180.1entrez:824585
GeneID:824585Genevisible:P25859GO:GO:0004693GO:GO:0005524
GO:GO:0005634GO:GO:0005737GO:GO:0007067GO:GO:0008353
GO:GO:0009826GO:GO:0010376GO:GO:0042023GO:GO:0048825
GO:GO:0051301GO:GO:0051726Gramene:AT3G54180.1hmmpanther:PTHR24056
hmmpanther:PTHR24056:SF178HOGENOM:HOG000233024InParanoid:P25859IntAct:P25859
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
iPTMnet:P25859KEGG:ath:AT3G54180KO:K07760OMA:LLHIFRM
PaxDb:P25859Pfam:P25859Pfam:PF00069Pfscan:PS50011
PhylomeDB:P25859PIR:S23096PRIDE:P25859PRO:PR:P25859
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:P25859
Proteomes:UP000006548RefSeq:NP_190986.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:P25859STRING:3702.AT3G54180.1SUPFAM:SSF56112
TAIR:AT3G54180tair10-symbols:CDC2Btair10-symbols:CDKB1;1UniGene:At.10
UniProt:P25859
Coordinates (TAIR10) chr3:+:20059882..20061250
Molecular Weight (calculated) 35320.10 Da
IEP (calculated) 8.78
GRAVY (calculated) -0.27
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKYEKLEKV GEGTYGKVYK AMEKGTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLST SIYVVRLLCV EHVHQPSTKS QSTKSNLYLV FEYLDTDLKK
101: FIDSYRKGPN PKPLEPFLIQ KLMFQLCKGV AHCHSHGVLH RDLKPQNLLL VKDKELLKIA DLGLGRAFTV PLKSYTHEIV TLWYRAPEVL LGSTHYSTGV
201: DMWSVGCIFA EMVRRQALFP GDSEFQQLLH IFRLLGTPTE QQWPGVSTLR DWHVYPKWEP QDLTLAVPSL SPQGVDLLTK MLKYNPAERI SAKTALDHPY
301: FDSLDKSQF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)