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AT3G54170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : FKBP12 interacting protein 37
Curator
Summary (TAIR10)
Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.
Computational
Description (TAIR10)
FKBP12 interacting protein 37 (FIP37); Has 21268 Blast hits to 13212 proteins in 1142 species: Archae - 433; Bacteria - 2157; Metazoa - 10991; Fungi - 1638; Plants - 938; Viruses - 51; Other Eukaryotes - 5060 (source: NCBI BLink).
Protein Annotations
BioGrid:9901eggNOG:ENOG410XNW7eggNOG:KOG2991EMBL:AF084570EMBL:AL132957EMBL:AY063940EMBL:AY113943
EMBL:CP002686EnsemblPlants:AT3G54170EnsemblPlants:AT3G54170.1entrez:824584GeneID:824584Genevisible:Q9ZSZ8GO:GO:0000381
GO:GO:0005634GO:GO:0009506GO:GO:0016607GO:GO:0080009Gramene:AT3G54170.1hmmpanther:PTHR15217hmmpanther:PTHR15217:SF0
HOGENOM:HOG000005916InParanoid:Q9ZSZ8IntAct:Q9ZSZ8InterPro:IPR029732iPTMnet:Q9ZSZ8KEGG:ath:AT3G54170MINT:MINT-8060919
ncoils:CoilOMA:CKDNLASPANTHER:PTHR15217:SF0PaxDb:Q9ZSZ8Pfam:PF17098Pfam:Q9ZSZ8PhylomeDB:Q9ZSZ8
PIR:T47576PRIDE:Q9ZSZ8PRO:PR:Q9ZSZ8ProteinModelPortal:Q9ZSZ8Proteomes:UP000006548Reactome:R-ATH-72203RefSeq:NP_190985.1
STRING:3702.AT3G54170.1TAIR:AT3G54170tair10-symbols:ATFIP37tair10-symbols:FIP37UniGene:At.930UniProt:Q9ZSZ8
Coordinates (TAIR10) chr3:+:20056848..20059396
Molecular Weight (calculated) 37216.80 Da
IEP (calculated) 4.63
GRAVY (calculated) -0.81
Length 330 amino acids
Sequence (TAIR10)
(BLAST)
001: MEFSSQDDDF GGDDSAANAT RASGNRRSFG DLEDDEDDIF GSTTVAPGVR TGMILSLRGS LKNCKDDLAS CQNELESAKT EIQKWKSAFQ NESFVPAGKS
101: PEPRFLIDYI QNLKSSEKSL KEQLEIAKRK EASCIVQYAK REQEMAELKS AVRDLKSQLK PASMQARRLL LDPAIHEEFS RLKNLVEEKD KKIKELQDNI
201: AAVTFTPQSK NGKMLMAKCR TLQEENEEIG HQAAEGKIHE LAIKLAMQKS QNAELRSQFE GLYKHMEELT NDVERSNETV IILQEKLEEK EKEIERVKKG
301: LEIVSELVGD KKDEVDEIDE DAKEEIAGGE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)