AT3G54150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G55450.1); Has 989 Blast hits to 984 proteins in 381 species: Archae - 6; Bacteria - 545; Metazoa - 68; Fungi - 151; Plants - 164; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:20050802..20052742 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36646.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.02 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||
| Length | 323 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAALSEKEAE AYLDARPRYP IDWFKKIAAR TQDHKFAWDV GTGNGQAAIG LVEHYENVVA TDINEAQLQR AIKHSRISYH HTPTTISEDE MVDLLGGENS 101: VDLIVAAQAV HFFDLNVFYN VAKRVLRKEG GLIAVWVYND IIISHEIDPI MKRLVDSTLP FRTPIMNLAF DGYKTLTFPF ETIGMGSEGK PITLDIPHKL 201: SLKGFIGFLR SWQPAMKAKE KGVELINEDL ITKFEEAWGD ETQVKDVFYK AHMIVGKIPE EKFESDQVLS NKGRLLLETE VGRNQKRPQP SDEGDRQSKK 301: QNTSEDDACK DKPSSVFSTH YRF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)