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AT3G54050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : high cyclic electron flow 1
Curator
Summary (TAIR10)
Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).
Computational
Description (TAIR10)
high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3841 Blast hits to 3835 proteins in 1291 species: Archae - 49; Bacteria - 2352; Metazoa - 411; Fungi - 158; Plants - 388; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G54050-MONOMERBioCyc:ARA:GQT-118-MONOMERBioCyc:MetaCyc:AT3G54050-WS-MONOMERBioGrid:9889EC:3.1.3.11eggNOG:COG0158eggNOG:KOG1458
EMBL:AF428326EMBL:AL132957EMBL:AY039934EMBL:AY150450EMBL:BT000743EMBL:CP002686EMBL:X58148
EnsemblPlants:AT3G54050EnsemblPlants:AT3G54050.1EnsemblPlants:AT3G54050.2entrez:824572GeneID:824572Genevisible:P25851GO:GO:0005985
GO:GO:0009409GO:GO:0009507GO:GO:0009570GO:GO:0009735GO:GO:0009773GO:GO:0010319GO:GO:0015979
GO:GO:0016311GO:GO:0019253GO:GO:0030388GO:GO:0042132GO:GO:0046872GO:GO:0048046Gramene:AT3G54050.1
Gramene:AT3G54050.2gramene_pathway:3.1.3.11gramene_pathway:CALVIN-PWYgramene_pathway:GLYCOLYSISgramene_pathway:PWYQT-4428gramene_plant_reactome:1119519gramene_plant_reactome:6877169
HAMAP:MF_01855hmmpanther:PTHR11556hmmpanther:PTHR11556:SF16HOGENOM:HOG000191265InParanoid:P25851IntAct:P25851InterPro:IPR000146
InterPro:IPR020548InterPro:IPR028343InterPro:IPR033391KEGG:00010+3.1.3.11KEGG:00030+3.1.3.11KEGG:00051+3.1.3.11KEGG:00680+3.1.3.11
KEGG:00710+3.1.3.11KEGG:ath:AT3G54050KO:K03841OMA:YTTRYIGPANTHER:PTHR11556PaxDb:P25851Pfam:P25851
Pfam:PF00316PhylomeDB:P25851PIR:S16582PIR:T47564PIRSF:PIRSF000904PIRSF:PIRSF500210PRIDE:P25851
PRINTS:PR00115PRO:PR:P25851PROSITE:PS00124ProteinModelPortal:P25851Proteomes:UP000006548RefSeq:NP_001190083.1RefSeq:NP_190973.1
scanprosite:PS00124SMR:P25851STRING:3702.AT3G54050.1SUPFAM:SSF56655TAIR:AT3G54050tair10-symbols:HCEF1UniGene:At.22619
UniGene:At.51003UniPathway:UPA00116unipathway:UPA00138UniProt:P25851
Coordinates (TAIR10) chr3:+:20016951..20018527
Molecular Weight (calculated) 45164.40 Da
IEP (calculated) 5.05
GRAVY (calculated) -0.21
Length 417 amino acids
Sequence (TAIR10)
(BLAST)
001: MAATAATTTS SHLLLSSSRH VASSSQPSIL SPRSLFSNNG KRAPTGVRNH QYASGVRCMA VAADAAETKT AARKKSGYEL QTLTGWLLRQ EMKGEIDAEL
101: TIVMSSISLA CKQIASLVQR AGISNLTGVQ GAVNIQGEDQ KKLDVISNEV FSNCLRSSGR TGIIASEEED VPVAVEESYS GNYVVVFDPL DGSSNIDAAV
201: STGSIFGIYS PNDECIVDDS DDISALGSEE QRCIVNVCQP GNNLLAAGYC MYSSSVIFVL TLGKGVFSFT LDPMYGEFVL TQENIEIPKA GRIYSFNEGN
301: YQMWDDKLKK YIDDLKDPGP TGKPYSARYI GSLVGDFHRT LLYGGIYGYP RDAKSKNGKL RLLYECAPMS FIVEQAGGKG SDGHSRVLDI QPTEIHQRVP
401: LYIGSTEEVE KLEKYLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)