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AT3G53630.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 0.982
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXZNeggNOG:ENOG4112CW3EMBL:AY074586EMBL:AY097380
EMBL:CP002686EnsemblPlants:AT3G53630EnsemblPlants:AT3G53630.1entrez:824531
GeneID:824531Gramene:AT3G53630.1hmmpanther:PTHR35286hmmpanther:PTHR35286:SF1
IntAct:Q8VXU5KEGG:ath:AT3G53630ncoils:CoilOMA:EYRIWEW
PhylomeDB:Q8VXU5Proteomes:UP000006548RefSeq:NP_190931.2STRING:3702.AT3G53630.1
TAIR:AT3G53630UniGene:At.43532UniProt:Q8VXU5
Coordinates (TAIR10) chr3:+:19883986..19885568
Molecular Weight (calculated) 22208.80 Da
IEP (calculated) 4.60
GRAVY (calculated) -0.83
Length 194 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSFNGNSNI DNLLIQTLLG RLQIRPPNSH FLSQSLDDLL FKSDDSDGDD DGEGQTSLDR EEARLEKELI RVIVSGRSDS LKPNSGQAVT VNEHHICVGF
101: HEDEESDYRV WEWHGHIMLF DEENGYTPEY IYGNYFERLP VKLPNNRRVE KEKKKEMKEE EVENLGLREL IDGGDAAPGR ILHRNNINIG SSRV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)