suba logo
AT3G53570.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : FUS3-complementing gene 1
Curator
Summary (TAIR10)
a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast.
Computational
Description (TAIR10)
FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2394-MONOMEReggNOG:ENOG410XQF2eggNOG:KOG0671EMBL:AK317353
EnsemblPlants:AT3G53570EnsemblPlants:AT3G53570.1EnsemblPlants:AT3G53570.2EnsemblPlants:AT3G53570.4
entrez:824525ExpressionAtlas:B9DH08GeneID:824525GO:GO:0004672
GO:GO:0005524Gramene:AT3G53570.1Gramene:AT3G53570.2Gramene:AT3G53570.4
hmmpanther:PTHR24058hmmpanther:PTHR24058:SF44InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009KEGG:ath:AT3G53570KO:K08287OMA:FPHRIVD
PaxDb:B9DH08Pfam:P51566Pfam:PF00069Pfscan:PS50011
PhylomeDB:B9DH08PRIDE:B9DH08PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:B9DH08RefSeq:NP_001030853.1RefSeq:NP_190925.1RefSeq:NP_850695.2
scanprosite:PS00108SMART:SM00220SMR:B9DH08SMR:P51566
STRING:3702.AT3G53570.1SUPFAM:SSF56112TAIR:AT3G53570tair10-symbols:AFC1
tair10-symbols:AME2tair10-symbols:FC1UniGene:At.19871UniGene:At.277
UniProt:B9DH08UniProt:P51566
Coordinates (TAIR10) chr3:-:19861449..19864125
Molecular Weight (calculated) 54201.30 Da
IEP (calculated) 9.34
GRAVY (calculated) -0.46
Length 467 amino acids
Sequence (TAIR10)
(BLAST)
001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)