AT3G52640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Zn-dependent exopeptidases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 236 Blast hits to 233 proteins in 88 species: Archae - 0; Bacteria - 4; Metazoa - 152; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:19515078..19520290 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73011.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.45 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||||||||||
| Length | 676 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAMGLIRLLS IAFTLVLLSI LPLHLSLADE ITSIESVPDL QKLMYVAVDG FPCVRLLNLS GEIGCSNPGI NKVVAPIIKL KDVKDLVQPH TILVTADEME 101: DFFTRVSTDL SFASKIGGVL VESGSNFQQK LKGFSPDKRF PQAQFSPYEN VEYKWNSAAS SIMWRNYNFP VYLLSESGIS AVHEILSKKK MKHGTYTSDV 201: AEFNMVMETT KAGTHNSEAC LQEGTCLPLG GYSVWSSLPP ISVSSSNNRK PVVLTVASMD TASFFRDKSF GADSPISGLV ALLGAVDALS RVDGISNLKK 301: QLVFLVLTGE TWGYLGSRRF LHELDLHSDA VAGLSNTSIE TVLEIGSVGK GLSGGINTFF AHKTRVSSVT NMTLDALKIA QDSLASKNIK ILSADTANPG 401: IPPSSLMAFM RKNPQTSAVV LEDFDTNFVN KFYHSHLDDL SNINSSSVVA AASVVARTLY ILASDNKDTS NSALGSIHVN ASFVEELLTC LLACEPGLSC 501: NLVKDYISPT NTCPGNYAGV ILGEPSSKPY LGYVGDVSRF LWNFLADKTS VQKGNTTSVC SKGVCSKTDE VCIKAESNKE GTCVVSTTRY VPAYSTRLKY 601: NDGAWTILPQ NSSDSMGMVD PVWTESNWDT LRVHVYTVQH SAYDNAVLVA GITVTTLAYI GILAAKSIIT KALKQD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)