AT3G52570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G10030.1); Has 2648 Blast hits to 2646 proteins in 970 species: Archae - 27; Bacteria - 1772; Metazoa - 182; Fungi - 164; Plants - 106; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19501145..19502795 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37529.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||
| Length | 335 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MARTRIITNR FESRFLIRFL ESPTLFASCF TSSRSLQTLA YEEVRTSGDR ESESTALILH GLLGSGRNWR SFSRSLASSL SVSSASDWKM ILVDLRNHGR 101: SAEVEGLNPP HDLVNSAKDL ADLVKASGWN WPDVVIGHSL GGKVALQFME SCARGDFGES ASPPKQLWVL DSVPGEVKAE KSDGEVEKVL KTLQSLPSSI 201: PSRKWLVDRM VELGFSRSLS EWIGSNLKRS GDSETWTFNL DGAVQMFNSY RETSYWSLLE NPPKETEINF VIAEKSDRWD NDTTKRLETI ANQRQNVAEG 301: KVATHLLRNS GHWVHTDNPK GLLEIVSPNF FSPHE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)