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AT3G52070.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J6BGeggNOG:ENOG410Y0HGEMBL:AF370611EMBL:AL049711EMBL:AY084804EMBL:BT025021EMBL:CP002686
EnsemblPlants:AT3G52070EnsemblPlants:AT3G52070.1entrez:824370ExpressionAtlas:Q9SUZ7GeneID:824370GO:GO:0016021Gramene:AT3G52070.1
HOGENOM:HOG000131692KEGG:ath:AT3G52070OMA:MSCRKQKPhylomeDB:Q9SUZ7PIR:T49086Proteomes:UP000006548RefSeq:NP_190775.1
STRING:3702.AT3G52070.1TAIR:AT3G52070TMHMM:TMhelixUniGene:At.3209UniGene:At.74793UniProt:Q9SUZ7
Coordinates (TAIR10) chr3:+:19312753..19313097
Molecular Weight (calculated) 13244.30 Da
IEP (calculated) 10.70
GRAVY (calculated) -0.43
Length 114 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALSTTFYY HPLCTNHRTK RQASSRHGVR SMRVMSCRKQ KLPEENEGVI QRTLRRMISE AGKIGKNLKP EKKKGDVKDL MLMSLSFAVY VYISQLLVCA
101: YFSWQHLSFP KSSW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)