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AT3G51500.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0K4eggNOG:ENOG410YZTXEMBL:AL133452EMBL:BT025591EMBL:CP002686EnsemblPlants:AT3G51500EnsemblPlants:AT3G51500.1
entrez:824313GeneID:824313Gramene:AT3G51500.1hmmpanther:PTHR37740KEGG:ath:AT3G51500ncoils:CoilOMA:HAISHQL
PhylomeDB:Q9SCZ9PIR:T45781Proteomes:UP000006548RefSeq:NP_190718.1TAIR:AT3G51500UniGene:At.35381UniGene:At.75188
UniProt:Q9SCZ9
Coordinates (TAIR10) chr3:+:19108353..19108703
Molecular Weight (calculated) 13253.90 Da
IEP (calculated) 5.82
GRAVY (calculated) -0.82
Length 116 amino acids
Sequence (TAIR10)
(BLAST)
001: MQDSKIPPFS EAKRMKIPTP KQPLTQLPPR IGKKVSNRSK SNQVHAISHQ LEMSPNSDSS PGNEYRALRR KYLLLEEDSF ALERELKEAE DEVKALEDEK
101: LELLDKLVVM EGLVDP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)