suba logo
AT3G51270.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein serine/threonine kinases;ATP binding;catalytics
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12271 Blast hits to 8446 proteins in 803 species: Archae - 403; Bacteria - 1376; Metazoa - 3873; Fungi - 1548; Plants - 571; Viruses - 285; Other Eukaryotes - 4215 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0478eggNOG:KOG2268EMBL:CP002686EnsemblPlants:AT3G51270EnsemblPlants:AT3G51270.1entrez:824290ExpressionAtlas:F4J3A9
Gene3D:1.10.10.10GeneID:824290GO:GO:0004674GO:GO:0005524Gramene:AT3G51270.1hmmpanther:PTHR10593hmmpanther:PTHR10593:SF36
InParanoid:F4J3A9InterPro:IPR000687InterPro:IPR011009InterPro:IPR011991InterPro:IPR015285InterPro:IPR030484KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1ncoils:CoilOMA:ISEYAGWPANTHER:PTHR10593:SF36PaxDb:F4J3A9Pfam:PF01163Pfam:PF09202
PRIDE:F4J3A9ProteinModelPortal:F4J3A9Proteomes:UP000006548RefSeq:NP_190695.2SMART:SM00090SMR:F4J3A9STRING:3702.AT3G51270.1
SUPFAM:SSF46785SUPFAM:SSF56112TAIR:AT3G51270UniGene:At.53886UniProt:F4J3A9
Coordinates (TAIR10) chr3:+:19033851..19036772
Molecular Weight (calculated) 53023.40 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.71
Length 461 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLDVNVLRY LSKDDFRVLT AVEMGMRNHE IVPSELVERI ACLKHGGTYK VLKNLLKYKL LHHDSSKYDG FRLTYLGYDF LAIKTLVNRG IFTGVGRQIG
101: VGKESDIFEV AQEDGTILAM KLHRLGRTSF RAVKSKRDYL RHRSSFSWLY LSRLAALKEF AFMKALEEHD FPVPKAIDCN RHCVIMSLVQ GYPMVQVKQL
201: QNPETIFEKI IGIVVRLAEH GLIHCDFNEF NIMIDDEEKI TMIDFPQMVS VSHRNAQMYF DRDIECIFKF FRKRFNMSFH EDKGESEETE VDENSRPSFF
301: DITKDANALD KDLEASGFTR KEQTDLDKFI EGGVEKSEDS DEDEESDDEE QTCESNEEGN LNEIKSLQLQ DKEQKSSDGV EAEVELDNTE NGESNGDEDE
401: VGSNEEEEEK EAELEKNLGK VRRRAMAAAR GRRKSQSSRN TYKDKGRGSQ NSKIHSNMSG F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)