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AT3G51160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Catalyzes the first step in the de novo synthesis of GDP-L-fucose.
Computational
Description (TAIR10)
MURUS 1 (MUR1); FUNCTIONS IN: GDP-mannose 4,6-dehydratase activity; INVOLVED IN: 'de novo' GDP-L-fucose biosynthetic process, unidimensional cell growth; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: GDP-D-mannose 4,6-dehydratase 1 (TAIR:AT5G66280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G51160-MONOMERBioCyc:MetaCyc:AT3G51160-MONOMERBioGrid:9598BRENDA:4.2.1.47EC:4.2.1.47eggNOG:COG1089eggNOG:KOG1372
EMBL:AL132980EMBL:AY084574EMBL:BT025710EMBL:CP002686EMBL:U81805EnsemblPlants:AT3G51160EnsemblPlants:AT3G51160.1
entrez:824280EvolutionaryTrace:P93031Gene3D:3.40.50.720GeneID:824280Genevisible:P93031GO:GO:0005525GO:GO:0005829
GO:GO:0008446GO:GO:0009826GO:GO:0019673GO:GO:0042351Gramene:AT3G51160.1gramene_pathway:4.2.1.47gramene_pathway:PWY-66
HAMAP:MF_00955hmmpanther:PTHR10366hmmpanther:PTHR10366:SF346HOGENOM:HOG000168003InParanoid:P93031InterPro:IPR006368InterPro:IPR016040
iPTMnet:P93031KEGG:00051+4.2.1.47KEGG:00520+4.2.1.47KEGG:ath:AT3G51160KO:K01711OMA:CEAAFGHPaxDb:P93031
PDB:1N7GPDB:1N7HPDBsum:1N7GPDBsum:1N7HPfam:P93031Pfam:PF16363PhylomeDB:P93031
PIR:T45747PRIDE:P93031PRO:PR:P93031ProteinModelPortal:P93031Proteomes:UP000006548Reactome:R-ATH-6787639RefSeq:NP_190685.2
SMR:P93031STRING:3702.AT3G51160.1SUPFAM:SSF51735TAIR:AT3G51160tair10-symbols:GMD2tair10-symbols:MUR1tair10-symbols:MUR_1
TIGRfam:TIGR01472TIGRFAMs:TIGR01472UniGene:At.23910UniPathway:UPA00128UniProt:P93031
Coordinates (TAIR10) chr3:-:19007232..19008353
Molecular Weight (calculated) 41963.50 Da
IEP (calculated) 6.02
GRAVY (calculated) -0.43
Length 373 amino acids
Sequence (TAIR10)
(BLAST)
001: MASENNGSRS DSESITAPKA DSTVVEPRKI ALITGITGQD GSYLTEFLLG KGYEVHGLIR RSSNFNTQRI NHIYIDPHNV NKALMKLHYA DLTDASSLRR
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)