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AT3G51090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1640)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1640); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1640 (InterPro:IPR012439); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT2G16460.1); Has 506 Blast hits to 503 proteins in 168 species: Archae - 2; Bacteria - 7; Metazoa - 203; Fungi - 173; Plants - 82; Viruses - 2; Other Eukaryotes - 37 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111F9WeggNOG:KOG3156EMBL:AF386998EMBL:AY081502
EMBL:CP002686EnsemblPlants:AT3G51090EnsemblPlants:AT3G51090.1entrez:824273
GeneID:824273Gramene:AT3G51090.1hmmpanther:PTHR14360hmmpanther:PTHR14360:SF1
HOGENOM:HOG000005849InterPro:IPR024461KEGG:ath:AT3G51090ncoils:Coil
OMA:MRSELRHPfam:PF07798PhylomeDB:Q94F04Proteomes:UP000006548
RefSeq:NP_566943.1STRING:3702.AT3G51090.1TAIR:AT3G51090UniGene:At.20587
UniProt:Q94F04
Coordinates (TAIR10) chr3:-:18978192..18979853
Molecular Weight (calculated) 33689.50 Da
IEP (calculated) 9.91
GRAVY (calculated) -0.20
Length 298 amino acids
Sequence (TAIR10)
(BLAST)
001: MLTRLGNSLL SLLIFFQRRF PDPNFGLIEF KVSVFTNQFR ESFHLFFMAA YANYLRLARL GGTSSGVNLS TLRSFGYSNP AFDKTQEFRS SSSSLVSYSS
101: FRQFHARFIS QLIKTNGKRL FLVDTLALVR SLEAQGLPSK QAEAITGAIT EVLNDSLGVV SQLVVSKGEM QKAEMTQESN LSKFKSEINS SLDHHFSLLQ
201: HENEKLRNDI ERIRSDIRHE IDKVTAGQRL DLNLEKGRIR DELQNQNGET SNLTNKLDRE IHTLRAQLEA AKYEVIKYCI GTLVSISAVG LAVLRIVM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)