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AT3G50380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1162)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IQN1eggNOG:ENOG410ZUXTEMBL:CP002686EnsemblPlants:AT3G50380EnsemblPlants:AT3G50380.1entrez:824202GeneID:824202
Gramene:AT3G50380.1hmmpanther:PTHR16166hmmpanther:PTHR16166:SF98InParanoid:F4J0L9InterPro:IPR009543InterPro:IPR026847InterPro:IPR031645
KEGG:ath:AT3G50380ncoils:CoilOMA:KWEGASFPANTHER:PTHR16166PaxDb:F4J0L9Pfam:PF06650Pfam:PF16909
PRIDE:F4J0L9Proteomes:UP000006548RefSeq:NP_190607.2STRING:3702.AT3G50380.1TAIR:AT3G50380UniGene:At.1433UniProt:F4J0L9
Coordinates (TAIR10) chr3:-:18686527..18700533
Molecular Weight (calculated) 343769.00 Da
IEP (calculated) 7.03
GRAVY (calculated) -0.12
Length 3072 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTFLRNWVRR RLRTLLLPFS RDEPDLQVEL GFTDTLITLR SFRFDVSQLN QLFDESNFQF EKFTVDQLVV SFSVWSAPAI KFEIRGVNVK LSARGTDEGS
0101: SRRKRASSDT VANEIKKVLS SIDPKGCVLH DILEKMLGRS TSQISKLKTS FSNLILRHFR IQIHGINVQV CLPGSSDLSC LMEINELRSD SENFGNLSLV
0201: RSSAAAVLFP LRRSSFTLSC FGFNIGYKRD NEIVDLCGFD SLVMLITLHN LQLVDLVVRV PELSFSFRPT DLPVLMGLAN LSSKDSNYVR NGRYLWKVAA
0301: RRTGLMISPH SVSFQNLVSV VILWLRYVNA YEYLLSLAGY SRKMPEKSLL WKFSENKRHF VTARRKWEMI CNIEKELPAE AIARARRVAR YRACLNSQDA
0401: DDDYDESSLY GHFKYLSKTT WVLAYIWRLI SRTFWSIACF LWLNKLLTQE LQTDRNNEDD SECVSLEFHA VVNLGKLSVT CYPEKIISSF MTSKDSTGHV
0501: DSNIVMLCLS VDEFLVLYTV GCLTQYLSAS CGKLKVESSS FKNTSRFMKS TKDPSSSSEG NKKHMREDVK TILDMDPAQQ ISKTVNNHGS DQHEGMLHLQ
0601: NLLREMWLNW NSNCMKLDKS TFTISDKPCL LVDIKSCMAY EVVGNQDSEF WKCSMVLGKL DIVFEYSSLF SLALLIWQIE WAQKLLVDDY TGEVHSSSLV
0701: TGGVDPEMAS YDEYGIYRRS IELSLHRVHP ERQIQVGILL GGPQIKLLVE KAEEVNTLIG KKDILLFDFH DFEFVIWPTY KSDVVSSRMF QGPDNIRTDR
0801: PLLQELGLSD TVIPSYEKYV SQGWNSLSSH LRFSGFDCSF CKMAVKNWSQ VFVVRPVTIC FSSLSEAIMD FSIGLDVFVL GLTIVTKPDD LNAYFQMLLS
0901: LVSGLSRGLS GLSSGGHSSG QEFLRSDAVN VEHEIERNPC KTLFVVKASI KLKDIDVIFD VPAVDDKFER LVELDDTKIW SSVQEACIEL SVEEHKCLIN
1001: VDLCKLQSVL FKFEGNIWKS SGNFITESLL FRSHDILFEA CLSSCLLSVS MDCSSPSALG DASTANEPST NNVQVQREVK TLDSASDLLP SNSIRWMHIN
1101: LALTDLLVAK GSTKNVLVDV RRSSKFVTSV SIGRRFQSIS CSVEGVLFVL EPKALIGLIH GYSTYLYLIS SKVSVIQNSA PVLEKFEADS SVTEISIPSQ
1201: QENGYPVEAF SIDVAQFALG FVCDDEYGAI REIVLEITLH SSLDSAGGEQ KFLCEVSRLS VLSKILESVE RDINITQFSS PAFSSESSSF LPGTPLETSF
1301: QQSDVISSGD STSVSGDFNS LREFSANSNL QEEFHSRYNN YILEDLRVSA SVKKRENTGH QFSQAWAGAC SVLGFDITIS LSELQMVLSM LSLFAAIPGG
1401: DSAHASLERP SSFNSESERS FESVVPDGAI VAIQDINQHM FVTVEDGGNK CVVTGTLHYS LVGERALFRV SYHRHQGWNS STLWFSLTSL YAKNNKGEPL
1501: RLNYHSSSDI VNVSGLYDNA PTLFRASSGE SENYKGDIDW ETYRKLVKDT FYLVNKKSDS AVAFIDGFPE FVRKPGNPFK FKVFHESLAT RSLTPVVPSE
1601: IHESETHSVM VDSSPPSITV TIDGVSLTIV HELSETRDRF PLFRGSVNIT QLTVQMLSSK VRIMSTSNIL VLYFDAQTNQ WREFIHPVEV SAFYRSTFQT
1701: RDLNNTMHKV PTHIYCRIGK LEVFLTELSL DMLLFLLGKL EFAGPFSVKT SAILSNCCKI ENLSGLDLIC RFNEKQTATV GRKQTAAIFL RHSMNHQQEA
1801: SPVAAVQLSS GKFITSSINV SLLEARTLAW RTRIISLLDS RSHPGPFVVV DIKKGLEDGL SISVSPLTRI HNETSLPIEI RFQRSKQKRD EFASVPLKPG
1901: GSIDDSVAAF NAISSSGDMK KALTSLAVGN FSLSFRPESF ETLFEGEKSL GSEWSEELEG GKAVRLTGIF DKLSYGVKKA LSIESVKVSL TTTYCSVTSE
2001: SQCVGKVHFL IHSIRREVSI IRPDASSDVL EKQKACIALR EQKEIFLLPT VQVSNFLSSE AAILLTETDQ NTSMERHSIG KHATIQSGKT IDFYVNPDMI
2101: YFRVTLTTSQ ASCKPVNSGQ WVKKLQKQKN DAQCLDVDLD FSGGKYCASL RLSLGKRGIL EAAVFTSYIL KNDSDCTLFF FPPDQKPLSR EDMEKLDHIV
2201: PPEFGLYLPP KTEGSWFLRS RKVGVILADG HGATEAVLDL DALSGLTEIS LGTKDESGFR HLVINESEET INIRQHYFQD DSVGIITIKS KQRAALRLQE
2301: ETIQKKELHL FENFIKKHGS DSANSLIFIQ FRKQSGEAGR GAIEFASVNV TEEGSTLAVH FQKPPNTPPP YRIENFLHSA SLTYYQKDSS EIEVLGPGSG
2401: ADYAWDDMTL PHKLVVIVDG MIPLREVSLD KVRPWKPLFK ATQHRSIASH LMMKKKAKDH KTADKELSRI PMVKVGYEVY ADGLTRVIRI CEVSESLKGD
2501: SAFQSRSKIQ FRVTHLGVHL LEKVKQNAEE KTVVSYSPIL VARLENVGLH SMFTDQQKFN QLCIEALNVD HKWAGAPFAA MLRQHQSSSS DANGCLFKCV
2601: FILVSSGSSV TQVKHSSIVL QPVNLNLDEE TLMRVVAFWR SSLSTNTQSS QYYFDHFEIH PIKITANFVP GSSYSSYNSA QETLRSLLHS VVKVPHIKNM
2701: VVELNGVLVT HALITVRELL LRCVKHYSWY AMRAIYIAKG SPLLPPAFAS MFDDFSSSSL DAFFDPSRGL VNVPGLTVGT FKLLSKLIDN KGLSGTRRYF
2801: GDLGKTLRTA GSNVVFVALT EISDSVLRGA EMKGVDGLVS GFHHGILKLA MEPSVIGTAL MEGGPDRTIK LDRNPGIDEL YIEGYLQAML DTMYRQEYLR
2901: VKVIDDQVFL KNLPPSNSLI DEMIDRVKDF LESRGLLKGD PSSSRPRRRL HGDKEWKIGP TVLTLCEHLF VSFAIRILKQ HATKAITSLR PKKEEAEAET
3001: SDSGSNTAMV PVVSDNKKKK MKFMWKAGIG NFVASGIVAY IDGRLCRQIP NPIARRIVSG FLLSFLDKSS EQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)