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AT3G50300.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.962
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 2344 Blast hits to 2339 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 196; Plants - 2144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G50300EnsemblPlants:AT3G50300.1entrez:824192Gene3D:3.30.559.10GeneID:824192GO:GO:0016747
Gramene:AT3G50300.1hmmpanther:PTHR31896hmmpanther:PTHR31896:SF12InParanoid:F4J0K8InterPro:IPR003480InterPro:IPR023213iPTMnet:F4J0K8
KEGG:ath:AT3G50300OMA:SIDVHAIPaxDb:F4J0K8Pfam:PF02458PRIDE:F4J0K8ProteinModelPortal:F4J0K8Proteomes:UP000006548
RefSeq:NP_190599.2SMR:F4J0K8STRING:3702.AT3G50300.1TAIR:AT3G50300UniGene:At.50262UniProt:F4J0K8
Coordinates (TAIR10) chr3:+:18644043..18645389
Molecular Weight (calculated) 50251.90 Da
IEP (calculated) 6.46
GRAVY (calculated) -0.16
Length 448 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDVTVISSS IVQPGNARHS GREKIHLTPS DLSLLYLNYP QRSLLFPKPY PETRFISRLK SSLSTSLEIY FPLAGRLVKV NNHEDNTVSF YIDCDDGRGV
101: KFVHAIAESV SVSDILQPHG SVPDFFRLFF PMNGVRSIDG LSEPLLALQV TEIKDGIVIS FGYNHLVADG SSMWNFIHVW SKLCLNGQWE IHQPLVLRGW
201: FLDNIDFPIH IPASEIETER ARNREVSTKE RVFHFTKEKL SDLKAKANDE IGSSDIKISS LQAVLAHLWR SIVRHSGLNQ EEESRCGVAA DFRQRLNPPL
301: DKDCFGNVAN LGLTTATVGD LLDRGLGWAA LQINKTVRLH TNENFRTFSE NWVRNGKIPR IDVRSRMGDH GFMVSNSPWF QVYDNDFGLG KPMAVRAGPA
401: NGIGGKLVVF RGIEEGSIDV HAILTLSLWS DVLLNLFDDV ESLENVIT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)