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AT3G49960.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: root hair specific 19 (TAIR:AT5G67400.1); Has 4501 Blast hits to 4474 proteins in 294 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 165; Plants - 4270; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Protein Annotations
EC:1.11.1.7eggNOG:ENOG410IJ72eggNOG:ENOG4111FDSEMBL:AK227572EnsemblPlants:AT3G49960EnsemblPlants:AT3G49960.1entrez:824158
ExpressionAtlas:Q0WTI3GeneID:824158GO:GO:0004601GO:GO:0005576GO:GO:0006979GO:GO:0020037GO:GO:0042744
GO:GO:0046872Gramene:AT3G49960.1hmmpanther:PTHR31517hmmpanther:PTHR31517:SF3InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255
InterPro:IPR019793InterPro:IPR019794KEGG:00940+1.11.1.7KEGG:ath:AT3G49960KO:K00430OMA:KIFHANFPaxDb:Q0WTI3
PaxDb:Q96510Pfam:PF00141Pfam:Q96510Pfscan:PS50873PhylomeDB:Q0WTI3PRIDE:Q0WTI3PRINTS:PR00458
PRINTS:PR00461PROSITE:PS00435PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q0WTI3RefSeq:NP_190565.1scanprosite:PS00435
scanprosite:PS00436SMR:Q0WTI3STRING:3702.AT3G49960.1SUPFAM:SSF48113TAIR:AT3G49960UniGene:At.19626UniProt:Q0WTI3
UniProt:Q96510
Coordinates (TAIR10) chr3:-:18524313..18525610
Molecular Weight (calculated) 35757.90 Da
IEP (calculated) 9.49
GRAVY (calculated) -0.12
Length 329 amino acids
Sequence (TAIR10)
(BLAST)
001: MARFDIVLLI GLCLIISVFP DTTTAQLSRG FYSKTCPNVE QIVRNAVQKK IKKTFVAVPA TLRLFFHDCF VNGCDASVMI QSTPKNKAEK DHPDNISLAG
101: DGFDVVIQAK KALDSNPSCR NKVSCADILT LATRDVVVAA GGPSYEVELG RFDGLVSTAS SVEGNLPGPS DNVDKLNALF TKNKLTQEDM IALSAAHTLG
201: FAHCGKVFKR IHKFNGINSV DPTLNKAYAI ELQKACPKNV DPRIAINMDP VTPKTFDNTY FKNLQQGKGL FTSDQVLFTD GRSRPTVNAW ASNSTAFNRA
301: FVIAMTKLGR VGVKNSSNGN IRRDCGAFN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)