suba logo
AT3G49760.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : basic leucine-zipper 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 5 (bZIP5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root stele, pericycle, root, primary root elongation zone, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 6 (TAIR:AT2G22850.2); Has 1431 Blast hits to 1431 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 4; Plants - 1340; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0R9eggNOG:ENOG4111AY9EMBL:AK226923EMBL:BT024823EMBL:CP002686EnsemblPlants:AT3G49760EnsemblPlants:AT3G49760.1
entrez:824138GeneID:824138GO:GO:0003700GO:GO:0043565Gramene:AT3G49760.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF186
HOGENOM:HOG000090752InterPro:IPR004827KEGG:ath:AT3G49760ncoils:CoilOMA:MMSTISPPfam:PF07716Pfscan:PS50217
PhylomeDB:Q29PT3PROSITE:PS00036PROSITE:PS50217Proteomes:UP000006548RefSeq:NP_566925.1scanprosite:PS00036SMART:SM00338
SMR:Q29PT3STRING:3702.AT3G49760.1SUPFAM:SSF57959TAIR:AT3G49760tair10-symbols:AtbZIP5tair10-symbols:bZIP5UniGene:At.35571
UniProt:Q29PT3
Coordinates (TAIR10) chr3:-:18455569..18456039
Molecular Weight (calculated) 18361.10 Da
IEP (calculated) 9.99
GRAVY (calculated) -0.74
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)