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AT3G48720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.986
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G63560.1); Has 2937 Blast hits to 2921 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 209; Plants - 2721; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G48720-MONOMEReggNOG:ENOG410IY69eggNOG:ENOG410YUQMEMBL:AK175279EMBL:AL133315EMBL:CP002686EnsemblPlants:AT3G48720
EnsemblPlants:AT3G48720.1entrez:824033Gene3D:3.30.559.10GeneID:824033GO:GO:0005829GO:GO:0010143GO:GO:0033494
GO:GO:0050734Gramene:AT3G48720.1gramene_pathway:2.3.1.133gramene_pathway:PWY-361gramene_pathway:PWY-5868hmmpanther:PTHR31642hmmpanther:PTHR31642:SF10
InterPro:IPR003480InterPro:IPR023213KEGG:ath:AT3G48720OMA:KSINVFLPfam:PF02458PhylomeDB:Q9SMM7PIR:T46216
Proteomes:UP000006548RefSeq:NP_190441.1SMR:Q9SMM7STRING:3702.AT3G48720.1TAIR:AT3G48720UniGene:At.35691UniProt:Q9SMM7
Coordinates (TAIR10) chr3:+:18046527..18049295
Molecular Weight (calculated) 48007.10 Da
IEP (calculated) 5.37
GRAVY (calculated) -0.07
Length 430 amino acids
Sequence (TAIR10)
(BLAST)
001: MVASSEFIVT RKNPELIPPV SETPNGHYYL SNLDQNIAII VKTLYYYKSE SRTNQESYNV IKKSLSEVLV HYYPVAGRLT ISPEGKIAVN CTGEGVVVVE
101: AEANCGIDTI KEAISENRME TLEKLVYDVP GARNILEIPP VVVQVTNFKC GGFVLGLGMS HNMFDGVAAA EFLNSWCEMA KGLPLSVPPF LDRTILRSRN
201: PPKIEFPHNE FDEIEDISDT GKIYDEEKLI YKSFLFEPEK LEKLKIMAIE ENNNNKVSTF QALTGFLWKS RCEALRFKPD QRVKLLFAAD GRSRFIPRLP
301: QGYCGNGIVL TGLVTSSGEL VGNPLSHSVG LVKRLVELVT DGFMRSAMDY FEVNRTRPSM NATLLITSWS KLTLHKLDFG WGEPVFSGPV GLPGREVILF
401: LPSGDDMKSI NVFLGLPTSA MEVFEELMKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)