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AT3G48360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BTB and TAZ domain protein 2
Curator
Summary (TAIR10)
encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones.
Computational
Description (TAIR10)
BTB and TAZ domain protein 2 (BT2); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 1 (TAIR:AT5G63160.1); Has 1199 Blast hits to 1199 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 703; Fungi - 0; Plants - 445; Viruses - 2; Other Eukaryotes - 49 (source: NCBI BLink).
Protein Annotations
BioGrid:9313eggNOG:COG5076eggNOG:KOG1778EMBL:AK226596EMBL:AL049659EMBL:AY040015EMBL:AY079408
EMBL:AY316675EMBL:BT000678EMBL:CP002686EnsemblPlants:AT3G48360EnsemblPlants:AT3G48360.1entrez:823994Gene3D:1.20.1020.10
GeneID:823994Genevisible:Q94BN0GO:GO:0003712GO:GO:0004402GO:GO:0005516GO:GO:0005634GO:GO:0005737
GO:GO:0006355GO:GO:0007623GO:GO:0008270GO:GO:0009409GO:GO:0009553GO:GO:0009555GO:GO:0009611
GO:GO:0009651GO:GO:0009733GO:GO:0009734GO:GO:0009737GO:GO:0009738GO:GO:0009743GO:GO:0009751
GO:GO:0009753GO:GO:0010167GO:GO:0010182GO:GO:0016567GO:GO:0042542GO:GO:0051973Gramene:AT3G48360.1
hmmpanther:PTHR24413hmmpanther:PTHR24413:SF75HOGENOM:HOG000239221InParanoid:Q94BN0IntAct:Q94BN0InterPro:IPR000197InterPro:IPR000210
InterPro:IPR011333KEGG:ath:AT3G48360KO:K00517OMA:CKRRNNDPaxDb:Q94BN0Pfam:PF00651Pfam:PF02135
Pfam:Q94BN0Pfscan:PS50097PhylomeDB:Q94BN0PIR:T06706PRIDE:Q94BN0PRO:PR:Q94BN0PROSITE:PS50097
ProteinModelPortal:Q94BN0Proteomes:UP000006548RefSeq:NP_566902.1SMART:SM00225SMART:SM00551SMR:Q94BN0STRING:3702.AT3G48360.1
SUPFAM:SSF54695SUPFAM:SSF57933TAIR:AT3G48360tair10-symbols:ATBT2tair10-symbols:BT2UniGene:At.21922UniGene:At.67255
UniPathway:UPA00143UniProt:Q94BN0
Coordinates (TAIR10) chr3:-:17908482..17910471
Molecular Weight (calculated) 41563.90 Da
IEP (calculated) 9.07
GRAVY (calculated) -0.34
Length 364 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)