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AT3G48185.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.876
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AY063777EMBL:AY091284EMBL:CP002686EnsemblPlants:AT3G48185EnsemblPlants:AT3G48185.1entrez:823974GeneID:823974
GO:GO:0016021Gramene:AT3G48185.1HOGENOM:HOG000150659KEGG:ath:AT3G48185OMA:SSTCAYEProteomes:UP000006548RefSeq:NP_566898.1
TAIR:AT3G48185TMHMM:TMhelixUniGene:At.47232UniProt:Q8VZW8
Coordinates (TAIR10) chr3:-:17793050..17793307
Molecular Weight (calculated) 10043.90 Da
IEP (calculated) 4.81
GRAVY (calculated) 0.23
Length 85 amino acids
Sequence (TAIR10)
(BLAST)
1: MFVSSSTCAY EIQKGNQASR SDPSLHQSDL HLENYQIKCV CFYSFFSFCV SFSFDYPLYF YLLLFFFFRI SPFSDRCFGL TDLDL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)