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AT3G48040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : RHO-related protein from plants 10
Curator
Summary (TAIR10)
Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling.
Computational
Description (TAIR10)
RHO-related protein from plants 10 (ROP10); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 10 (TAIR:AT5G62880.1); Has 24141 Blast hits to 24113 proteins in 664 species: Archae - 8; Bacteria - 48; Metazoa - 12688; Fungi - 3443; Plants - 2679; Viruses - 20; Other Eukaryotes - 5255 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G48040-MONOMERBioGrid:9278DIP:DIP-29823NeggNOG:COG1100eggNOG:KOG0393EMBL:AF079486EMBL:AF115475
EMBL:AK117324EMBL:AL049658EMBL:BT005228EMBL:CP002686EnsemblPlants:AT3G48040EnsemblPlants:AT3G48040.1entrez:823959
Gene3D:3.40.50.300GeneID:823959Genevisible:Q9SU67GO:GO:0003924GO:GO:0005525GO:GO:0005622GO:GO:0005886
GO:GO:0007264GO:GO:0009738GO:GO:0009788Gramene:AT3G48040.1hmmpanther:PTHR24072hmmpanther:PTHR24072:SF149HOGENOM:HOG000233974
InParanoid:Q9SU67IntAct:Q9SU67InterPro:IPR001806InterPro:IPR005225InterPro:IPR027417KEGG:ath:AT3G48040KO:K04392
OMA:LSNILCGPaxDb:Q9SU67Pfam:PF00071Pfam:Q9SU67Pfscan:PS51420PhylomeDB:Q9SU67PIR:T06679
PIR:T48860PRIDE:Q9SU67PRO:PR:Q9SU67PROSITE:PS51420ProteinModelPortal:Q9SU67Proteomes:UP000006548RefSeq:NP_566897.1
SMR:Q9SU67STRING:3702.AT3G48040.1SUPFAM:SSF52540SwissPalm:Q9SU67TAIR:AT3G48040tair10-symbols:ARAC8tair10-symbols:ATRAC8
tair10-symbols:ATROP10tair10-symbols:ROP10TIGRfam:TIGR00231TIGRFAMs:TIGR00231UniGene:At.3140UniProt:Q9SU67
Coordinates (TAIR10) chr3:+:17731561..17733241
Molecular Weight (calculated) 23069.90 Da
IEP (calculated) 9.51
GRAVY (calculated) -0.17
Length 208 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)