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AT3G47833.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT3G47833-MONOMEReggNOG:ENOG410J0IWeggNOG:ENOG410Y7N2EMBL:AF360297
EMBL:AL049746EMBL:AY084936EMBL:AY113994EMBL:CP002686
EnsemblPlants:AT3G47833EnsemblPlants:AT3G47833.1entrez:823938GeneID:823938
Genevisible:Q9C5E8GO:GO:0005739GO:GO:0005749GO:GO:0006099
GO:GO:0045273GO:GO:0048046Gramene:AT3G47833.1hmmpanther:PTHR36041
HOGENOM:HOG000240989iPTMnet:Q9C5E8KEGG:ath:AT3G47833OMA:CYEIYAR
PaxDb:Q9C5E8Pfam:Q9C5E8PhylomeDB:Q9C5E8PIR:T07722
PRIDE:Q9C5E8PRO:PR:Q9C5E8Proteomes:UP000006548RefSeq:NP_566894.1
STRING:3702.AT3G47833.1SwissPalm:Q9C5E8TAIR:AT3G47833UniGene:At.3251
UniPathway:UPA00223UniProt:Q9C5E8
Coordinates (TAIR10) chr3:+:17648721..17649829
Molecular Weight (calculated) 10298.60 Da
IEP (calculated) 10.93
GRAVY (calculated) -0.19
Length 93 amino acids
Sequence (TAIR10)
(BLAST)
1: MAFLLNTSIS SHLRSSSQKT DGALAQSRRG FHVELGAREK ALLAEDASLR RFKSHKKGVH RLKRIGDVLT VVVVAGCCYE IYARVMRKEA QAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)