AT3G47590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: BAAT/Acyl-CoA thioester hydrolase C-terminal (InterPro:IPR014940); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G29840.1); Has 4006 Blast hits to 4003 proteins in 1107 species: Archae - 84; Bacteria - 2507; Metazoa - 7; Fungi - 75; Plants - 235; Viruses - 7; Other Eukaryotes - 1091 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:17536133..17537515 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35050.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.04 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||
| Length | 309 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRTLLHNFNF VPQDSPYYKT SPFPTSSFFN VRFPIKNNQI SCNKAKNLRM DPSKGIQEQR IVIPNRHNEK LVGLLHETGS TDIVVLCHGF RSNKSNQIMN 101: NVAAAIQKEG ISAFRFDFSG NGESEGSFYY GNYNHEADDL HSVVQYFSNK NRVVPIILGH SKGGDVVLLY ASKYHDVRNV INLSGRYDLK KGIRERLGED 201: FLERIKQQGF IDVGDGKSGY RVTEKSLMDR LSTDIHEACL KIDKECRVLT VHGSEDEVIP VEDAKEFAKI IPNHKLEIVE GANHGYTEHQ SQLVSTVMEF 301: IKTVIVKNN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)