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AT3G47510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J736eggNOG:ENOG41117CYEMBL:AL132955EMBL:CP002686EnsemblPlants:AT3G47510EnsemblPlants:AT3G47510.1entrez:823905
GeneID:823905Gramene:AT3G47510.1hmmpanther:PTHR33474hmmpanther:PTHR33474:SF6HOGENOM:HOG000077400KEGG:ath:AT3G47510OMA:SHIFFFP
PIR:T45711Proteomes:UP000006548RefSeq:NP_190335.1TAIR:AT3G47510TMHMM:TMhelixUniGene:At.43890UniProt:Q9SN87
Coordinates (TAIR10) chr3:+:17511173..17511615
Molecular Weight (calculated) 9737.05 Da
IEP (calculated) 8.79
GRAVY (calculated) -0.09
Length 85 amino acids
Sequence (TAIR10)
(BLAST)
1: MANKALIHLL VIFFLALSHI FFFPSHASRL GSLMEKPKIV RPQQDTLMDV KKEVEERMVM ELNDYPGSGA NNRHLPRQRG CVVDC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)