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AT3G47430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peroxin 11B
Curator
Summary (TAIR10)
member of the peroxin11 (PEX11) gene family, located on the peroxisome membrane, controls peroxisome proliferation.
Computational
Description (TAIR10)
peroxin 11B (PEX11B); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11A (TAIR:AT1G47750.1); Has 320 Blast hits to 320 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 85; Plants - 134; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Protein Annotations
BioGrid:9217eggNOG:ENOG4111NS6eggNOG:KOG4186EMBL:AJ520107EMBL:AL096860EMBL:BT002033EMBL:BT006271
EMBL:CP002686EnsemblPlants:AT3G47430EnsemblPlants:AT3G47430.1entrez:823897GeneID:823897Genevisible:Q9STY0GO:GO:0005777
GO:GO:0005778GO:GO:0005779GO:GO:0007031GO:GO:0016559GO:GO:0042802GO:GO:0044375Gramene:AT3G47430.1
hmmpanther:PTHR12652hmmpanther:PTHR12652:SF17HOGENOM:HOG000239990InParanoid:Q9STY0InterPro:IPR008733iPTMnet:Q9STY0KEGG:ath:AT3G47430
OMA:MNDTVDKPaxDb:Q9STY0Pfam:PF05648Pfam:Q9STY0PhylomeDB:Q9STY0PIR:T12998PRIDE:Q9STY0
PRO:PR:Q9STY0Proteomes:UP000006548RefSeq:NP_190327.1STRING:3702.AT3G47430.1TAIR:AT3G47430tair10-symbols:PEX11BTMHMM:TMhelix
UniGene:At.35807UniProt:Q9STY0
Coordinates (TAIR10) chr3:+:17480798..17481692
Molecular Weight (calculated) 25599.30 Da
IEP (calculated) 10.24
GRAVY (calculated) 0.10
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLDTVDKLV VFLAKRDGID KLVKTFQYVA KLACWHVEAT RPEAADRFKK WEVASGLSRK AFRTGRSLTG FNALRRNPGA TPMIRFLAVL ANSGEMVYFF
101: FDHFLWLSRI GSIDAKLAKK MSFISAFGES FGYTFFIIID CIFIKQRLKS LKKLQHSTDE PKEEIGAKIS EIRGDIVMRL MGISANVADL LIALAEIHPN
201: PFCNHTITLG ISGLVSAWAG WYRNWPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)