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AT3G46880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59080.1); Has 51 Blast hits to 51 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J220eggNOG:ENOG410ZE5BEMBL:AL096859EMBL:CP002686EnsemblPlants:AT3G46880EnsemblPlants:AT3G46880.1entrez:823841
GeneID:823841Gramene:AT3G46880.1hmmpanther:PTHR33738HOGENOM:HOG000238466KEGG:ath:AT3G46880PhylomeDB:Q9STG0PIR:T12960
Proteomes:UP000006548RefSeq:NP_190272.1TAIR:AT3G46880UniGene:At.53806UniProt:Q9STG0
Coordinates (TAIR10) chr3:+:17265293..17266266
Molecular Weight (calculated) 17054.00 Da
IEP (calculated) 9.37
GRAVY (calculated) -0.61
Length 153 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGKGRVGSS SSSSFTAQLF GPKEPSSSAN FNSIFPPSKG TARNILSSKH GSLEQRKEAG TCNLSSSLYY GGQDVYSHPT HNHTYPTKRQ NLLTLQNVES
101: FRLTRIRTEI TTMPIRLTPL EETGGKVHYI TRSFSKCVSV EEYQVETEQY LIV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)