AT3G46760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.971 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G59270.1); Has 106201 Blast hits to 104998 proteins in 3052 species: Archae - 91; Bacteria - 11388; Metazoa - 38798; Fungi - 8833; Plants - 31302; Viruses - 404; Other Eukaryotes - 15385 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:17222027..17223040 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38209.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.00 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 337 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFAGIFLRMG AALRSMYVNS KYEEVREEWE EDYSPQRFSY KALYKATKGF KESELFGTEA NGTVYKGKLS SNAQIAVKRV SLDAEQDTKH LVSQIVGIGK 101: LRHKNLVQLL GYCRRKGELL LVYDYMPYGN LDDFLFNEER PNLSWSQRFH IIKGVASALL YLHEQIVLHR DVKAANVLLD EDLNGRLDYG LARFGTNRNP 201: MLGSVGYVAP ELIITGMPTT KADVYSFGAL LLEFACGRMF IEYPGKPEEF NLISWVCQCW KRGNLVGARD ARLEGDYVCK EIEMVLKLGL LCAQYNPEDR 301: PSMSQVVNYL EGNDVLPEMP PDTPGISIPT PYHEVLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)