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AT3G46530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.871
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NB-ARC domain-containing disease resistance protein
Curator
Summary (TAIR10)
Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.
Computational
Description (TAIR10)
RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, incompatible interaction, defense response, plant-type hypersensitive response; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46730.1); Has 13323 Blast hits to 13008 proteins in 390 species: Archae - 6; Bacteria - 196; Metazoa - 157; Fungi - 35; Plants - 12889; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG4658EMBL:AF209730EMBL:AF209731EMBL:AF209732EMBL:AL133314EMBL:AY037179
EMBL:BT002246EMBL:CP002686EnsemblPlants:AT3G46530EnsemblPlants:AT3G46530.1entrez:823806Gene3D:3.40.50.300Gene3D:3.80.10.10
GeneID:823806Genevisible:Q9M667GO:GO:0005524GO:GO:0005737GO:GO:0005886GO:GO:0009626GO:GO:0009814
GO:GO:0043531Gramene:AT3G46530.1hmmpanther:PTHR23155hmmpanther:PTHR23155:SF402InParanoid:Q9M667InterPro:IPR002182InterPro:IPR027417
InterPro:IPR032675iPTMnet:Q9M667KEGG:ath:AT3G46530ncoils:CoilOMA:IRESEYKPaxDb:Q9M667Pfam:PF00931
Pfam:Q9M667PhylomeDB:Q9M667PIR:T45590PIR:T51185PIR:T51186PRIDE:Q9M667PRO:PR:Q9M667
ProteinModelPortal:Q9M667Proteomes:UP000006548RefSeq:NP_190237.1SMR:Q9M667STRING:3702.AT3G46530.1SUPFAM:SSF52058SUPFAM:SSF52540
TAIR:AT3G46530tair10-symbols:RPP13UniGene:At.589UniProt:Q9M667
Coordinates (TAIR10) chr3:-:17130739..17133246
Molecular Weight (calculated) 97273.00 Da
IEP (calculated) 6.49
GRAVY (calculated) -0.28
Length 835 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)