AT3G46370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1); Has 158526 Blast hits to 120263 proteins in 4504 species: Archae - 95; Bacteria - 12978; Metazoa - 44044; Fungi - 9573; Plants - 73487; Viruses - 375; Other Eukaryotes - 17974 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:17051955..17055514 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88812.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.85 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 793 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRNCYNLSVH KETKYLIRVT SNYGNYDGRN EPPRFDLYLG PNFWVTIDLG KHVNGDTWKE IIHIPKSNSL DVCLIKTGTT TPIISTLELR SLPKYSYNAI 101: SGSLKSTLRA FLSESTEVIR YPNDFYDRMW VPHFETEWKQ ISTNLKVNSS NGYLLPQDVL MTAAIPVNTS ARLSFTENLE FPHDELYLYF HFSEVQVLQA 201: NQSREFSILW NGMVIYPDFI PDYLGAATVY NPSPSLCEVG KCLLELERTQ KSTLPPLLNA IEVFTVMNFP QSETNDDDVI AITKIKDTHR LNRTSWQGDP 301: CVPQLFSWAG LSCIDTNVST PPRIISLNLS SSGLTGNIAT GIQNLTKLQK LDLSNNNLTG VVPEFLANMK SLLFIDLRKN KLNGSIPKTL LDRKKKGLQL 401: FVDGDDDKGD DNKCLSGSCV PKMKFPLMIV ALAVSAVVVI AVVMILIFLF RKKKKSSLGI TSAAISEESI ETKRRRFTYS EVVEMTKNFQ KTLGEGGFGT 501: VYYGNLNGSE QVAVKVLSQS SSQGYKHFKA EVELLLRVHH INLVSLVGYC DERNHLALIY ECMSNGDLKD HLSGKKGNAV LKWSTRLRIA VDAALGLEYL 601: HYGCRPSIVH RDVKSTNILL DDQLMAKIAD FGLSRSFKLG EESQASTVVA GTLGYLDPEY YRTCRLAEMS DVYSFGILLL EIITNQNVID HAREKAHITE 701: WVGLVLKGGD VTRIVDPNLD GEYNSRSVWR ALELAMSCAN PSSEHRPIMS QVVIDLKECL NTENSMKIKK NDTDNDGSLE LSSSDTEAVP CAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)