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AT3G46340.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.958
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1); Has 163065 Blast hits to 121532 proteins in 4648 species: Archae - 95; Bacteria - 13859; Metazoa - 44066; Fungi - 9550; Plants - 76922; Viruses - 348; Other Eukaryotes - 18225 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G46340-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IF1SEMBL:AL133298EMBL:CP002686EnsemblPlants:AT3G46340
EnsemblPlants:AT3G46340.1entrez:823779Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:823779Genevisible:Q9SNA3GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT3G46340.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44HOGENOM:HOG000116550
InParanoid:Q9SNA3InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788InterPro:IPR032675iPTMnet:Q9SNA3KEGG:ath:AT3G46340OMA:LAMMCANPaxDb:Q9SNA3
Pfam:PF07714Pfam:PF12819Pfam:PF13855Pfam:Q9SNA3Pfscan:PS50011PhylomeDB:Q9SNA3PIR:T45691
PRIDE:Q9SNA3PRO:PR:Q9SNA3PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9SNA3Proteomes:UP000006548
RefSeq:NP_190218.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9SNA3STRING:3702.AT3G46340.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT3G46340TMHMM:TMhelixUniGene:At.53788UniProt:Q9SNA3
Coordinates (TAIR10) chr3:+:17026658..17031842
Molecular Weight (calculated) 99558.80 Da
IEP (calculated) 5.50
GRAVY (calculated) -0.22
Length 889 amino acids
Sequence (TAIR10)
(BLAST)
001: MEFPHSVLLV VLIIATFAIS NLVQAEEDQE GFISLDCGLP PNEVSPYIEP FTGLRFSSDS SFIQSGKIGK VDKSFEATTL KSYMTLRYFP DGKRNCYNLI
101: VKQGKTYMIR ATALYGNYDG LNISPKFDLY IGANFWTTLD AGEYLSGVVE EVNYIPRSNS LDVCLVKTDT STPFLSLLEL RPLDNDSYLT GSGSLKTFRR
201: YYLSNSESVI AYPEDVKDRI WEPTFDSEWK QIWTTLKPNN SNGYLVPKNV LMTAAIPAND SAPFRFTEEL DSPTDELYVY LHFSEVQSLQ ANESREFDIL
301: WSGEVAYEAF IPEYLNITTI QTNTPVTCPG GKCNLELKRT KNSTHPPLIN AIEFYTVVNF PQLETNETDV VAIKDIKATY ELNRITWQGD PCVPQKFIWE
401: GLDCNSKDAL TLPRITSLNL SSTGLTGNIA AGIQNLTHLD KLDLSNNNLT GGVPEFLASM KSLSFINLSK NNLNGSIPQA LLKREKDGLK LSVDEQIRCF
501: PGSCVITKKK FPVMIVALVS SAVVVILVVL VLIFVFKKKK PSNLEDLPPS SNTPRENITS TSISDTSIET KRKRFSYSEV MEMTKNLQRP LGEGGFGVVY
601: HGDINGSSQQ VAVKLLSQSS TQGYKEFKAE VELLLRVHHI NLVSLVGYCD ERDHLALIYE YMSNKDLKHH LSGKHGGSVL KWNTRLQIAV DAALGLEYLH
701: IGCRPSMVHR DVKSTNILLD DQFTAKMADF GLSRSFQLGD ESQVSTVVAG TPGYLDPEYY RTGRLAEMSD VYSFGIVLLE IITNQRVIDP AREKSHITEW
801: TAFMLNRGDI TRIMDPNLQG DYNSRSVWRA LELAMMCANP SSEKRPSMSQ VVIELKECIR SENKTQGMDS HSSFEQSMSF DTKAVPSAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)