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AT3G46010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : actin depolymerizing factor 1
Curator
Summary (TAIR10)
Actin-depolymerizing factor (ADF) and cofilin define a family of actin-binding proteins essential for the rapid turnover of filamentous actin in vivo.
Computational
Description (TAIR10)
actin depolymerizing factor 1 (ADF1); FUNCTIONS IN: actin binding; INVOLVED IN: actin filament organization; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 4 (TAIR:AT5G59890.1); Has 1496 Blast hits to 1495 proteins in 266 species: Archae - 0; Bacteria - 3; Metazoa - 633; Fungi - 166; Plants - 513; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).
Protein Annotations
BioGrid:9064eggNOG:ENOG41122P5eggNOG:KOG1735EMBL:AF102173EMBL:AL162459EMBL:AY035154EMBL:AY062940
EMBL:AY085853EMBL:CP002686EMBL:U48938EnsemblPlants:AT3G46010EnsemblPlants:AT3G46010.1entrez:823744EvolutionaryTrace:Q39250
ExpressionAtlas:Q39250Gene3D:3.40.20.10GeneID:823744Genevisible:Q39250GO:GO:0015629GO:GO:0030042hmmpanther:PTHR11913
hmmpanther:PTHR11913:SF22HOGENOM:HOG000039697InParanoid:Q39250InterPro:IPR002108InterPro:IPR017904InterPro:IPR029006iPTMnet:Q39250
PANTHER:PTHR11913PaxDb:Q39250PDB:1F7SPDBsum:1F7SPfam:PF00241Pfam:Q39250Pfscan:PS51263
PhylomeDB:Q39250PRIDE:Q39250PRO:PR:Q39250PROSITE:PS51263ProteinModelPortal:Q39250Proteomes:UP000006548RefSeq:NP_190187.1
SMART:SM00102SMR:Q39250STRING:3702.AT3G46010.2SUPFAM:SSF55753TAIR:AT3G46010tair10-symbols:ADF1tair10-symbols:atadf
tair10-symbols:ATADF1UniGene:At.21187UniProt:Q39250
Coordinates (TAIR10) chr3:-:16909679..16910678
Molecular Weight (calculated) 16113.40 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.37
Length 139 amino acids
Sequence (TAIR10)
(BLAST)
001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VVVEKVGQPI QTYEEFAACL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDIAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVFRSRAN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)