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AT3G45750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.949
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nucleotidyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1); Has 1473 Blast hits to 1374 proteins in 212 species: Archae - 0; Bacteria - 1; Metazoa - 793; Fungi - 286; Plants - 167; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5260eggNOG:KOG2277EMBL:AK229682EMBL:BT008622
EMBL:CP002686EnsemblPlants:AT3G45750EnsemblPlants:AT3G45750.1entrez:823717
ExpressionAtlas:Q7Y216GeneID:823717GO:GO:0016740Gramene:AT3G45750.1
hmmpanther:PTHR12271hmmpanther:PTHR12271:SF38OMA:WREEERYPhylomeDB:Q7Y216
Proteomes:UP000006548RefSeq:NP_190161.2SMR:Q7Y216STRING:3702.AT3G45750.1
SUPFAM:SSF81301SUPFAM:SSF81631TAIR:AT3G45750UniGene:At.35992
UniProt:Q7Y216
Coordinates (TAIR10) chr3:-:16793855..16797380
Molecular Weight (calculated) 77239.30 Da
IEP (calculated) 10.20
GRAVY (calculated) -0.56
Length 682 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)