AT3G45740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : hydrolase family protein / HAD-superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:16790830..16793280 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41910.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.35 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||
| Length | 376 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNHLLILARN SLRRRNFNLR PPSRSFSSTI SPESNRSSFG IAFDIDGVIL LGSSPVGGSP SALRRLYDDS GALKIPFLFL TNGGGLPESK RASEMSHLLG 101: VQVSPLQVIQ AHSPFRKLVN RFENELVVAA GKGEPAAVMS NYGFKNVISM DEYASYFDNI DPLAPYKKLM FRQDGHKELR SREDVLSQRV QAAFIVSDPV 201: DWSRDIQVLC DILRTGGLPG KEIGPQPHLY IANDDLDYQT EFPTERLGMG AFRIALESIF NRIHEKPLEY TSFGKPNPFV FKNAEDVLKE IATSPYSSNQ 301: GSHHFKTLYM IGDNPKIDIR GARQAGTPWF SILTRTGVFK GKDNHSEFPA DLVVDTVEEA VDFILTRESA KQSLLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)