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AT3G45160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Putative membrane lipoprotein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; Has 13 Blast hits to 13 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXNQeggNOG:ENOG41103TTEMBL:AK227692EMBL:AL138649EMBL:BT006388EMBL:CP002686EnsemblPlants:AT3G45160
EnsemblPlants:AT3G45160.1entrez:823652GeneID:823652Gramene:AT3G45160.1hmmpanther:PTHR36040hmmpanther:PTHR36040:SF2HOGENOM:HOG000153223
IntAct:Q9M1U3KEGG:ath:AT3G45160OMA:EKIEHPRPfscan:PS51257PIR:T47456Proteomes:UP000006548RefSeq:NP_190102.1
STRING:3702.AT3G45160.1TAIR:AT3G45160TMHMM:TMhelixUniGene:At.63589UniProt:Q9M1U3
Coordinates (TAIR10) chr3:-:16533655..16533930
Molecular Weight (calculated) 9984.88 Da
IEP (calculated) 6.09
GRAVY (calculated) -0.51
Length 91 amino acids
Sequence (TAIR10)
(BLAST)
1: MGINSKHVVV VIMVMMVIIS SCLAARNIIP RETNQESEKV SREMIIGKEE DSTEKIEHPR SSVENHHYIP RQDFYNYGPG GENNGGGGGG G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)